Department of Chemical and Biological Engineering, Princeton University, Princeton, New Jersey 08544, USA.
Department of Biomedical Engineering and Center for Biological Systems Engineering, Washington University in Saint Louis, Saint Louis, Missouri 63130, USA.
Nat Chem. 2017 Nov;9(11):1118-1125. doi: 10.1038/nchem.2803. Epub 2017 Jun 26.
Many intracellular membraneless organelles form via phase separation of intrinsically disordered proteins (IDPs) or regions (IDRs). These include the Caenorhabditis elegans protein LAF-1, which forms P granule-like droplets in vitro. However, the role of protein disorder in phase separation and the macromolecular organization within droplets remain elusive. Here, we utilize a novel technique, ultrafast-scanning fluorescence correlation spectroscopy, to measure the molecular interactions and full coexistence curves (binodals), which quantify the protein concentration within LAF-1 droplets. The binodals of LAF-1 and its IDR display a number of unusual features, including 'high concentration' binodal arms that correspond to remarkably dilute droplets. We find that LAF-1 and other in vitro and intracellular droplets are characterized by an effective mesh size of ∼3-8 nm, which determines the size scale at which droplet properties impact molecular diffusion and permeability. These findings reveal how specific IDPs can phase separate to form permeable, low-density (semi-dilute) liquids, whose structural features are likely to strongly impact biological function.
许多细胞内无膜细胞器通过内在无序蛋白质(IDP)或区域(IDR)的相分离形成。这些包括秀丽隐杆线虫蛋白 LAF-1,它在体外形成 P 颗粒样液滴。然而,蛋白质无序在相分离和液滴内的大分子组织中的作用仍然难以捉摸。在这里,我们利用一种新的技术,超快扫描荧光相关光谱法,来测量分子相互作用和完整的共存曲线(双结点),这定量了 LAF-1 液滴中的蛋白质浓度。LAF-1 及其 IDR 的双结点显示出许多不寻常的特征,包括与非常稀有的液滴相对应的“高浓度”双结点臂。我们发现 LAF-1 和其他体外和细胞内液滴的特征是有效网格尺寸约为 3-8nm,这决定了液滴特性影响分子扩散和渗透性的大小尺度。这些发现揭示了特定的 IDP 如何相分离形成可渗透的、低密度(半稀)液体,其结构特征可能强烈影响生物学功能。