Suppr超能文献

适应性免疫受体库社区关于共享免疫受体测序数据的建议。

Adaptive Immune Receptor Repertoire Community recommendations for sharing immune-repertoire sequencing data.

机构信息

Department of Microbiology and Immunology and Institute for Immunity, Transplantation and Infection, Stanford University School of Medicine, Stanford, California, USA.

Division of B Cell Immunology, German Cancer Research Center (DKFZ), Heidelberg, Germany.

出版信息

Nat Immunol. 2017 Nov 16;18(12):1274-1278. doi: 10.1038/ni.3873.

Abstract

High-throughput sequencing of B and T cell receptors is routinely being applied in studies of adaptive immunity. The Adaptive Immune Receptor Repertoire (AIRR) Community was formed in 2015 to address issues in AIRR sequencing studies, including the development of reporting standards for the sharing of data sets.

摘要

高通量测序技术在适应性免疫研究中得到了广泛应用。适应性免疫受体库(AIRR)社区于 2015 年成立,旨在解决 AIRR 测序研究中的问题,包括制定数据共享报告标准。

相似文献

2
AIRR Community Standardized Representations for Annotated Immune Repertoires.
Front Immunol. 2018 Sep 28;9:2206. doi: 10.3389/fimmu.2018.02206. eCollection 2018.
3
Invest 5% of research funds in ensuring data are reusable.
Nature. 2020 Feb;578(7796):491. doi: 10.1038/d41586-020-00505-7.
4
VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements.
BMC Bioinformatics. 2016 Oct 6;17(Suppl 13):333. doi: 10.1186/s12859-016-1214-3.
5
Data sharing statements for clinical trials.
BMJ. 2017 Jun 5;357:j2372. doi: 10.1136/bmj.j2372.
6
Data Sharing Statements for Clinical Trials.
Dtsch Arztebl Int. 2017 Jul 16;114(24):401-403. doi: 10.3238/arztebl.2017.0401.
7
Data, More Data, Big Data.
Int J Sports Physiol Perform. 2017 Jan;12(1):1. doi: 10.1123/IJSPP.2017-0012.
8
Data Sharing Statements for Clinical Trials: A Requirement of the International Committee of Medical Journal Editors.
Ann Intern Med. 2017 Jul 4;167(1):63-65. doi: 10.7326/M17-1028. Epub 2017 Jun 6.
9
Data Sharing Statements for Clinical Trials - A Requirement of the International Committee of Medical Journal Editors.
N Engl J Med. 2017 Jun 8;376(23):2277-2279. doi: 10.1056/NEJMe1705439. Epub 2017 Jun 5.

引用本文的文献

1
Enhancing sequence alignment of adaptive immune receptors through multi-task deep learning.
Nucleic Acids Res. 2025 Jul 8;53(13). doi: 10.1093/nar/gkaf651.
2
The BCR-SEQC initiative.
Nat Immunol. 2025 Jul;26(7):978-979. doi: 10.1038/s41590-025-02196-6.
3
Biparatopic binding of ISB 1442 to CD38 in trans enables increased cell antibody density and increased avidity.
MAbs. 2025 Dec;17(1):2457471. doi: 10.1080/19420862.2025.2457471. Epub 2025 Jan 30.
6
Expression Cloning of Antibodies from Single Human B Cells.
Methods Mol Biol. 2025;2865:103-124. doi: 10.1007/978-1-0716-4188-0_5.
7
8
Single-cell immune repertoire analysis.
Nat Methods. 2024 May;21(5):777-792. doi: 10.1038/s41592-024-02243-4. Epub 2024 Apr 18.

本文引用的文献

1
Novel Approaches to Analyze Immunoglobulin Repertoires.
Trends Immunol. 2017 Jul;38(7):471-482. doi: 10.1016/j.it.2017.05.003. Epub 2017 May 26.
2
Advanced Methodologies in High-Throughput Sequencing of Immune Repertoires.
Trends Biotechnol. 2017 Mar;35(3):203-214. doi: 10.1016/j.tibtech.2016.09.010. Epub 2016 Oct 26.
3
Applications of Immunogenomics to Cancer.
Cell. 2017 Feb 9;168(4):600-612. doi: 10.1016/j.cell.2017.01.014.
5
VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements.
BMC Bioinformatics. 2016 Oct 6;17(Suppl 13):333. doi: 10.1186/s12859-016-1214-3.
6
High-Throughput Sequencing-Based Immune Repertoire Study during Infectious Disease.
Front Immunol. 2016 Aug 31;7:336. doi: 10.3389/fimmu.2016.00336. eCollection 2016.
7
The FAIR Guiding Principles for scientific data management and stewardship.
Sci Data. 2016 Mar 15;3:160018. doi: 10.1038/sdata.2016.18.
8
Systems Approaches towards Molecular Profiling of Human Immunity.
Trends Immunol. 2016 Jan;37(1):53-67. doi: 10.1016/j.it.2015.11.006. Epub 2015 Dec 5.
9
Practical guidelines for B-cell receptor repertoire sequencing analysis.
Genome Med. 2015 Nov 20;7:121. doi: 10.1186/s13073-015-0243-2.
10
Bioinformatic and Statistical Analysis of Adaptive Immune Repertoires.
Trends Immunol. 2015 Nov;36(11):738-749. doi: 10.1016/j.it.2015.09.006. Epub 2015 Oct 25.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验