Instituto de Bioquı́mica Médica Leopoldo de Meis, Instituto Nacional de Ciência e Tecnologia de Biologia Estrutural e Bioimagem, Universidade Federal do Rio de Janeiro , Rio de Janeiro 21941-902, Brazil.
Departamento de Bioquímica e Imunologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais , 31270-901 Belo Horizonte, Brazil.
Acc Chem Res. 2018 Jan 16;51(1):181-190. doi: 10.1021/acs.accounts.7b00473. Epub 2017 Dec 20.
Prion-like behavior of several amyloidogenic proteins has been demonstrated in recent years. Despite having functional roles in some cases, irregular aggregation can have devastating consequences. The most commonly known amyloid diseases are Alzheimer's, Parkinson's, and Transmissible Spongiform Encephalopathies (TSEs). The pathophysiology of prion-like diseases involves the structural transformation of wild-type (wt) proteins to transmissible forms that can convert healthy proteins, generating aggregates. The mutant form of tumor suppressor protein, p53, has recently been shown to exhibit prion-like properties. Within the context of p53 aggregation and the search for ways to avert it, this review emphasizes discoveries, approaches, and research from our laboratory and others. Although its standard functions are strongly connected to tumor suppression, p53 mutants and aggregates are involved in cancer progression. p53 aggregates are heterogeneous assemblies composed of amorphous aggregates, oligomers, and amyloid-like fibrils. Evidence of these structures in tumor tissues, the in vitro capability for p53 mutants to coaggregate with wt protein, and the detection of cell-to-cell transmission indicate that cancer has the basic characteristics of prion and prion-like diseases. Various approaches aim to restore p53 functions in cancer. Methods include the use of small-molecule and peptide stabilizers of mutant p53, zinc administration, gene therapy, alkylating and DNA intercalators, and blockage of p53-MDM2 interaction. A primary challenge in developing small-molecule inhibitors of p53 aggregation is the large number of p53 mutations. Another issue is the inability to recover p53 function by dissociating mature fibrils. Consequently, efforts have emerged to target the intermediate species of the aggregation reaction. Φ-value analysis has been used to characterize the kinetics of the early phases of p53 aggregation. Our experiments using high hydrostatic pressure (HHP) and chemical denaturants have helped to clarify excited conformers of p53 that are prone to aggregation. Molecular dynamics (MD) and phasor analysis of single Trp fluorescence signals point toward the presence of preamyloidogenic conformations of p53, which are not observed for p63 or p73. Exploring the features of competent preamyloidogenic states of wt and different p53 mutants may provide a framework for designing personalized drugs for the restoration of p53 function. Protection of backbone hydrogen bonds (BHBs) has been shown to be an important factor for the stability of amyloidogenic proteins and was employed to identify and stabilize the structural defect resulting from the p53 Y220C mutation. Using MD simulations, we compared BHB protection factors between p53 family members to determine the donor-acceptor pairs in p53 that exhibit lower protection. The identification of structurally vulnerable sites in p53 should provide new insights into rational designs that can rapidly be screened using our experimental methodology. Through continued and combined efforts, the outlook is positive for the development of strategies for regulating p53 amyloid transformation.
近年来,已有研究表明几种淀粉样蛋白具有类朊病毒行为。尽管在某些情况下具有功能作用,但不规则聚集可能会产生毁灭性的后果。最常见的淀粉样疾病包括阿尔茨海默病、帕金森病和传染性海绵状脑病(TSEs)。类朊病毒疾病的病理生理学涉及到野生型(wt)蛋白向可传播形式的结构转化,这种形式可以使健康蛋白转化,产生聚集物。肿瘤抑制蛋白 p53 的突变体最近已被证明具有类朊病毒特性。在 p53 聚集和寻找避免聚集的方法的背景下,本文强调了我们实验室和其他实验室的发现、方法和研究。尽管其标准功能与肿瘤抑制密切相关,但 p53 突变体和聚集物参与了癌症的进展。p53 聚集物是由无定形聚集物、低聚物和类淀粉样纤维组成的异质组装体。肿瘤组织中存在这些结构的证据、p53 突变体在体外与 wt 蛋白共聚集的能力以及细胞间传播的检测表明,癌症具有朊病毒和类朊病毒疾病的基本特征。各种方法旨在恢复癌症中 p53 的功能。方法包括使用小分子和 p53 突变体的肽稳定剂、锌制剂、基因治疗、烷化剂和 DNA 插入剂,以及阻断 p53-MDM2 相互作用。开发 p53 聚集小分子抑制剂的主要挑战是 p53 突变体数量众多。另一个问题是无法通过解离成熟纤维来恢复 p53 功能。因此,人们已经努力将目标转向聚集反应的中间物种。Φ 值分析已用于表征 p53 聚集早期阶段的动力学。我们使用高压(HHP)和化学变性剂的实验有助于阐明易于聚集的 p53 激发构象。单色氨酸荧光信号的分子动力学(MD)和相分析表明存在 p53 的前淀粉样构象,而 p63 或 p73 则没有观察到这种构象。探索 wt 和不同 p53 突变体的有能力的前淀粉样构象特征可能为设计用于恢复 p53 功能的个性化药物提供框架。保护淀粉样蛋白形成蛋白的骨干氢键(BHBs)已被证明是稳定性的重要因素,并被用于鉴定和稳定由 p53 Y220C 突变引起的结构缺陷。使用 MD 模拟,我们比较了 p53 家族成员之间的 BHB 保护因子,以确定 p53 中显示出较低保护的供体-受体对。鉴定 p53 中结构脆弱的位点应该为合理设计提供新的见解,这些设计可以使用我们的实验方法快速筛选。通过持续和联合努力,调控 p53 淀粉样转化的策略的发展前景是积极的。