The Blizard Institute, Barts and The London School of Medicine and Dentistry, Queen Mary University of London, London, E1 2AT, UK.
Kennel Club Genetics Centre, Animal Health Trust, Newmarket, Suffolk, CB8 7UU, UK.
Genome Biol. 2018 Feb 16;19(1):22. doi: 10.1186/s13059-018-1397-1.
Mammalian species exhibit a wide range of lifespans. To date, a robust and dynamic molecular readout of these lifespan differences has not yet been identified. Recent studies have established the existence of ageing-associated differentially methylated positions (aDMPs) in human and mouse. These are CpG sites at which DNA methylation dynamics show significant correlations with age. We hypothesise that aDMPs are pan-mammalian and are a dynamic molecular readout of lifespan variation among different mammalian species.
A large-scale integrated analysis of aDMPs in six different mammals reveals a strong negative relationship between rate of change of methylation levels at aDMPs and lifespan. This relationship also holds when comparing two different dog breeds with known differences in lifespans. In an ageing cohort of aneuploid mice carrying a complete copy of human chromosome 21, aDMPs accumulate far more rapidly than is seen in human tissues, revealing that DNA methylation at aDMP sites is largely shaped by the nuclear trans-environment and represents a robust molecular readout of the ageing cellular milieu.
Overall, we define the first dynamic molecular readout of lifespan differences among mammalian species and propose that aDMPs will be an invaluable molecular tool for future evolutionary and mechanistic studies aimed at understanding the biological factors that determine lifespan in mammals.
哺乳动物的寿命跨度很大。迄今为止,尚未确定一种能够准确反映这些寿命差异的强大且动态的分子读数。最近的研究已经在人类和老鼠中建立了与衰老相关的差异甲基化位置(aDMP)的存在。这些是 CpG 位点,其 DNA 甲基化动态与年龄具有显著相关性。我们假设 aDMP 是泛哺乳动物的,并且是不同哺乳动物物种之间寿命变化的动态分子读数。
对六种不同哺乳动物的 aDMP 进行的大规模综合分析表明,aDMP 中甲基化水平变化率与寿命之间存在很强的负相关关系。当比较两种具有已知寿命差异的不同犬种时,这种关系仍然存在。在携带人类 21 号染色体完整拷贝的非整倍体老鼠的衰老队列中,aDMP 的积累速度比在人类组织中快得多,这表明 aDMP 位点的 DNA 甲基化在很大程度上受到核转环境的影响,并且是衰老细胞环境的一种强大的分子读数。
总的来说,我们定义了哺乳动物物种之间寿命差异的第一个动态分子读数,并提出 aDMP 将成为未来进化和机制研究的宝贵分子工具,旨在了解决定哺乳动物寿命的生物学因素。