MOE Key Lab of Bioinformatics, Department of Biological Science and Biotechnology, School of Life Science, Tsinghua-Peking Center for Life Sciences, Tsinghua University, Beijing, 100084, China.
Center for Nano and Micro-Mechanics, Tsinghua University, Beijing, 100084, China.
Appl Microbiol Biotechnol. 2018 May;102(10):4499-4510. doi: 10.1007/s00253-018-8931-7. Epub 2018 Apr 5.
High-cell-density cultivation is an effective way to improve the productivity of microbial fermentations and in turn reduce the cost of the final products, especially in the case of intracellular products. Halomonas bluephagenesis TD01 is a halophilic platform bacterium for the next generation of industrial biotechnology with a native PHA synthetic pathway, able to grow under non-sterile continuous fermentation conditions. A selection strategy for mutant strains that can grow to a high cell density was developed. Based on an error-prone DNA polymerase III ε subunit, a genome-wide random mutagenesis system was established and used in conjunction with an artificial high cell density culture environment during the selection process. A high-cell-density H. bluephagenesis TDHCD-R3 obtained after 3 rounds of selection showed an obvious enhancement of resistance to toxic metabolites including acetate, formate, lactate and ethanol compared to wild-type. H. bluephagenesis TDHCD-R3-8-3 constructed from H. bluephagenesis TDHCD-R3 by overexpressing an optimized phaCAB operon was able to grow to 15 g/L cell dry weight (CDW) containing 94% PHA in shake flask studies. H. bluephagenesis TDHCD-R3-8-3 was grown to more than 90 g/L CDW containing 79% PHA compared with only 81 g/L with 70% PHA by the wild type when incubated in a 7-L fermentor under the same conditions.
高密度培养是提高微生物发酵生产力并降低最终产品成本的有效方法,特别是对于胞内产物而言。盐单胞菌属 TD01 是一种嗜盐平台细菌,具有天然的 PHA 合成途径,能够在非无菌连续发酵条件下生长。开发了一种用于选择能够达到高密度的突变株的策略。基于易错 DNA 聚合酶 III ε 亚基,建立了一个全基因组随机诱变系统,并在选择过程中与人工高细胞密度培养环境结合使用。经过 3 轮筛选后获得的一株高密度盐单胞菌 H. bluephagenesis TDHCD-R3 与野生型相比,对包括乙酸盐、甲酸盐、乳酸盐和乙醇在内的有毒代谢物的抗性明显增强。通过过表达优化的 phaCAB 操纵子构建的 H. bluephagenesis TDHCD-R3-8-3 在摇瓶研究中能够生长到 15 g/L 细胞干重 (CDW),其中含有 94%的 PHA。在相同条件下,在 7-L 发酵罐中培养时,与野生型相比,H. bluephagenesis TDHCD-R3-8-3 能够生长到超过 90 g/L CDW,其中含有 79%的 PHA,而野生型仅能生长到 81 g/L,其中含有 70%的 PHA。