1 RIBEF Ibero-American Network of Pharmacogenetics and Pharmacogenomics , Badajoz, Spain .
2 Universidad de Extremadura , Badajoz, Spain .
OMICS. 2018 Sep;22(9):575-588. doi: 10.1089/omi.2018.0114. Epub 2018 Sep 11.
Pharmacogenetic variation in Latin Americans is understudied, which sets a barrier for the goal of global precision medicine. The RIBEF-CEIBA Network Consortium was established to characterize interindividual and between population variations in CYP2D6, CYP2C9, and CYP2C19 drug metabolizing enzyme genotypes, which were subsequently utilized to catalog their "predicted drug metabolism phenotypes" across Native American and Ibero American populations. Importantly, we report in this study, a total of 6060 healthy individuals from Ibero-America who were classified according to their self-reported ancestry: 1395 Native Americans, 2571 Admixed Latin Americans, 96 Afro-Latin Americans, 287 white Latin Americans (from Cuba), 1537 Iberians, and 174 Argentinean Ashkenazi Jews. Moreover, Native Americans were grouped into North-, Central-, and South Amerindians (from Mexico, Costa Rica, and Peru, respectively). All subjects were studied for the most common and functional CYP2D6, CYP2C9, and CYP2C19 allelic variants, and grouped as genotype-predicted poor or ultrarapid metabolizer phenotypes (gPMs and gUMs, respectively). Native Americans showed differences from each ethnic group in at least two alleles of CYP2D6, CYP2C9, and CYP2C19. Native Americans had higher frequencies of wild-type alleles for all genes, and lower frequency of CYP2D641, CYP2C92, and CYP2C19*17 (p < 0.05). Native Americans also showed less CYP2C19 gUMs than the rest of the population sample. In addition, differences within Native Americans (mostly North vs. South) were also found. The interethnic differences described supports the need for population-specific personalized and precision medicine programs for Native Americans. To the best of our knowledge, this is the largest study carried out in Native Americans and other Ibero-American populations analyzing CYP2D6, CYP2C9, and CYP2C19 genetic polymorphisms. Population pharmacogenomics is a nascent field of global health and warrants further research and education.
拉丁美洲人群的药物遗传学变异研究不足,这为实现全球精准医学的目标设置了障碍。RIBEF-CEIBA 网络联盟的成立旨在描述 CYP2D6、CYP2C9 和 CYP2C19 药物代谢酶基因型的个体间和人群间变异,随后利用这些变异来对其在美洲原住民和伊比利亚裔人群中的“预测药物代谢表型”进行分类。重要的是,我们在这项研究中报告了来自伊比利亚美洲的总共 6060 名健康个体,他们根据自我报告的祖先进行了分类:1395 名美洲原住民、2571 名混合拉丁裔、96 名非裔拉丁裔、287 名来自古巴的白人拉丁裔、1537 名伊比利亚人以及 174 名阿根廷阿什肯纳兹犹太人。此外,美洲原住民分为北美、中美和南美印第安人(分别来自墨西哥、哥斯达黎加和秘鲁)。所有受试者均接受了最常见和功能性 CYP2D6、CYP2C9 和 CYP2C19 等位基因变异的研究,并被分为基因型预测的差代谢者或超快代谢者表型(gPM 和 gUM)。美洲原住民在 CYP2D6、CYP2C9 和 CYP2C19 的至少两个等位基因上与每个族群都存在差异。美洲原住民所有基因的野生型等位基因频率较高,而 CYP2D641、CYP2C92 和 CYP2C19*17 的频率较低(p<0.05)。与其他人群样本相比,美洲原住民的 CYP2C19 gUM 也较少。此外,还发现了美洲原住民内部(主要是北美与南美之间)的差异。所描述的种族间差异表明,需要为美洲原住民制定特定于人群的个性化和精准医学计划。据我们所知,这是在美洲原住民和其他伊比利亚裔人群中进行的最大规模的 CYP2D6、CYP2C9 和 CYP2C19 遗传多态性分析研究。人群药物基因组学是全球健康领域的一个新兴领域,需要进一步的研究和教育。