School of Pharmacy and Biomolecular Sciences , Liverpool John Moores University , Byrom Street Campus , Liverpool L3 3AF , U.K.
Biochemistry. 2018 Oct 30;57(43):6132-6143. doi: 10.1021/acs.biochem.8b00787. Epub 2018 Oct 16.
Amide bonds at the proline nitrogen are particularly susceptible to rotation, affording cis and trans isomers. Installation of a stereochemically defined electron-withdrawing fluorine atom or fluorinated groups has the power to influence the cis- trans conformational preferences of the amide bond in X-(F)Pro (where X = any other amino acid). Advantageously, this also provides a sensitive reporter for F nuclear magnetic resonance (NMR) studies of protein conformation, interactions, and dynamics. We deliberately use the term "fluorinated prolines" as an all-encompassing term to describe proline analogues containing one or more fluorine atoms and to avoid confusion with the more well-known 4-fluoroprolines. This review presents a critical discussion of the growing repertoire of fluorinated prolines that have been described and, importantly, provides a comparison of their uses and relative influence on amide-bond conformation and discusses the significant potential of using F NMR as a tool to probe conformational changes in polypeptides.
酰胺键在脯氨酸氮原子处特别容易旋转,形成顺式和反式异构体。在立体化学定义的吸电子氟原子或氟化基团的安装具有影响酰胺键在 X-(F)Pro 中顺反构象偏好的能力(其中 X = 任何其他氨基酸)。有利的是,这也为 F 核磁共振(NMR)研究蛋白质构象、相互作用和动力学提供了一个敏感的报告器。我们故意使用“氟化脯氨酸”一词作为一个包罗万象的术语来描述含有一个或多个氟原子的脯氨酸类似物,并避免与更著名的 4-氟脯氨酸混淆。这篇综述对已经描述过的越来越多的氟化脯氨酸进行了批判性讨论,重要的是,对它们的用途和对酰胺键构象的相对影响进行了比较,并讨论了使用 F NMR 作为探测多肽构象变化的工具的巨大潜力。