Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Howard Hughes Medical Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Nucleic Acids Res. 2019 Jan 8;47(D1):D853-D858. doi: 10.1093/nar/gky1095.
The UCSC Genome Browser (https://genome.ucsc.edu) is a graphical viewer for exploring genome annotations. For almost two decades, the Browser has provided visualization tools for genetics and molecular biology and continues to add new data and features. This year, we added a new tool that lets users interactively arrange existing graphing tracks into new groups. Other software additions include new formats for chromosome interactions, a ChIP-Seq peak display for track hubs and improved support for HGVS. On the annotation side, we have added gnomAD, TCGA expression, RefSeq Functional elements, GTEx eQTLs, CRISPR Guides, SNPpedia and created a 30-way primate alignment on the human genome. Nine assemblies now have RefSeq-mapped gene models.
UCSC 基因组浏览器(https://genome.ucsc.edu)是一个用于探索基因组注释的图形查看器。近二十年来,该浏览器为遗传学和分子生物学提供了可视化工具,并不断添加新的数据和功能。今年,我们添加了一个新工具,使用户可以交互式地将现有的图形轨道排列到新的组中。其他软件新增功能包括染色体相互作用的新格式、用于轨迹中心的 ChIP-Seq 峰显示以及对 HGVS 的改进支持。在注释方面,我们添加了 gnomAD、TCGA 表达、RefSeq 功能元件、GTEx eQTLs、CRISPR 指南、SNPpedia,并在人类基因组上创建了 30 个灵长类动物的对齐。现在有九个组装体具有 RefSeq 映射的基因模型。