Department of Molecular Biology and Genetics, Howard Hughes Medical Institute, Johns Hopkins University, School of Medicine, Baltimore, MD, USA.
Whitehead Institute, Massachusetts Institute of Technology, Boston, MA, USA.
Nat Struct Mol Biol. 2019 Mar;26(3):220-226. doi: 10.1038/s41594-019-0193-2. Epub 2019 Mar 4.
RNA granules are subcellular compartments that are proposed to form by liquid-liquid phase separation (LLPS), a thermodynamic process that partitions molecules between dilute liquid phases and condensed liquid phases. The mechanisms that localize liquid phases in cells, however, are not fully understood. P granules are RNA granules that form in the posterior of Caenorhabditis elegans embryos. Theoretical studies have suggested that spontaneous LLPS of the RNA-binding protein PGL-3 with RNA drives the assembly of P granules. We find that the PGL-3 phase is intrinsically labile and requires a second phase for stabilization in embryos. The second phase is formed by gel-like assemblies of the disordered protein MEG-3 that associate with liquid PGL-3 droplets in the embryo posterior. Co-assembly of gel phases and liquid phases confers local stability and long-range dynamics, both of which contribute to localized assembly of P granules. Our findings suggest that condensation of RNA granules can be regulated spatially by gel-like polymers that stimulate LLPS locally in the cytoplasm.
RNA 颗粒是细胞内的亚细胞隔室,据推测是通过液-液相分离(LLPS)形成的,这是一种将分子分配到稀液相和浓缩液相之间的热力学过程。然而,将液相定位在细胞中的机制尚不完全清楚。P 颗粒是在秀丽隐杆线虫胚胎后端形成的 RNA 颗粒。理论研究表明,RNA 结合蛋白 PGL-3 的自发 LLPS 驱动 P 颗粒的组装。我们发现 PGL-3 相本质上不稳定,需要在胚胎中形成第二相来稳定。第二相是由无序蛋白 MEG-3 的凝胶状组装形成的,它与胚胎后端的液体 PGL-3 液滴结合。凝胶相与液相的共组装赋予了局部稳定性和长程动力学,这两者都有助于 P 颗粒的局部组装。我们的发现表明,RNA 颗粒的凝聚可以通过刺激细胞质中局部 LLPS 的凝胶状聚合物在空间上进行调节。