Department of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, Victoria, Australia.
Department of Anesthesiology, Columbia University, New York, New York, USA.
Protein Sci. 2020 Nov;29(11):2245-2258. doi: 10.1002/pro.3956. Epub 2020 Oct 5.
PfSERA5, a significantly abundant protein present within the parasitophorous vacuole (PV) and essential for normal growth during the blood-stage life cycle of the malaria parasite Plasmodium falciparum, displays structural similarity to many other cysteine proteases. However, PfSERA5 does not exhibit any detectable protease activity and therefore the role of the PfSERA5 papain-like domain (PfSERA5E), thought to remain bound to its cognate prodomain, remains unknown. In this study, we present a revised structure of the central PfSERA5E domain at a resolution of 1.2 Å, and the first structure of the "zymogen" of this papain-like domain including its cognate prodomain (PfSERA5PE) to 2.2 Å resolution. PfSERA5PE is somewhat structurally similar to that of other known proenzymes, retaining the conserved overall folding and orientation of the prodomain through, and occluding, the archetypal papain-like catalytic triad "active-site" cleft, in the same reverse direction as conventional prodomains. Our findings are congruent with previously identified structures of PfSERA5E and of similar "zymogens" and provide a foundation for further investigation into the function of PfSERA5.
PfSERA5 是疟原虫(Plasmodium falciparum)血期生活周期中正常生长所必需的一种在寄生泡(PV)中大量存在的蛋白质,与许多其他半胱氨酸蛋白酶具有结构相似性。然而,PfSERA5 不表现出任何可检测的蛋白酶活性,因此 PfSERA5 木瓜蛋白酶样结构域(PfSERA5E)的作用仍然未知,据推测其仍然与其同源前肽结合。在这项研究中,我们以 1.2 Å 的分辨率呈现了 PfSERA5E 结构域的中心部分的修正结构,以及该木瓜蛋白酶样结构域的“酶原”的第一个结构,分辨率为 2.2 Å,包括其同源前肽(PfSERA5PE)。PfSERA5PE 在结构上与其他已知的酶原有些相似,通过保留前肽的保守总体折叠和取向,以及通过与传统前肽相同的反向,阻塞了典型的木瓜蛋白酶样催化三联体“活性位点”裂缝,来保持其同源前肽的结构相似性。我们的发现与之前鉴定的 PfSERA5E 结构和类似的“酶原”结构一致,为进一步研究 PfSERA5 的功能提供了基础。