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一种针对COVID-19的潜在预防解决方案:通过综合免疫信息学和分子建模方法开发针对SARS-CoV-2的新型多表位疫苗候选物。

A Putative Prophylactic Solution for COVID-19: Development of Novel Multiepitope Vaccine Candidate against SARS-COV-2 by Comprehensive Immunoinformatic and Molecular Modelling Approach.

作者信息

Rehman Hafiz Muzzammel, Mirza Muhammad Usman, Ahmad Mian Azhar, Saleem Mahjabeen, Froeyen Matheus, Ahmad Sarfraz, Gul Roquyya, Alghamdi Huda Ahmed, Aslam Muhammad Shahbaz, Sajjad Muhammad, Bhinder Munir Ahmad

机构信息

Institute of Biochemistry and Biotechnology, University of the Punjab, Lahore 54590, Punjab, Pakistan.

Department of Human Genetics and Molecular Biology, University of Health Sciences, Lahore 54590, Punjab, Pakistan.

出版信息

Biology (Basel). 2020 Sep 18;9(9):296. doi: 10.3390/biology9090296.

Abstract

The outbreak of 2019-novel coronavirus (SARS-CoV-2) that causes severe respiratory infection (COVID-19) has spread in China, and the World Health Organization has declared it a pandemic. However, no approved drug or vaccines are available, and treatment is mainly supportive and through a few repurposed drugs. The urgency of the situation requires the development of SARS-CoV-2-based vaccines. Immunoinformatic and molecular modelling are time-efficient methods that are generally used to accelerate the discovery and design of the candidate peptides for vaccine development. In recent years, the use of multiepitope vaccines has proved to be a promising immunization strategy against viruses and pathogens, thus inducing more comprehensive protective immunity. The current study demonstrated a comprehensive in silico strategy to design stable multiepitope vaccine construct (MVC) from B-cell and T-cell epitopes of essential SARS-CoV-2 proteins with the help of adjuvants and linkers. The integrated molecular dynamics simulations analysis revealed the stability of MVC and its interaction with human Toll-like receptors (TLRs), which trigger an innate and adaptive immune response. Later, the in silico cloning in a known pET28a vector system also estimated the possibility of MVC expression in . Despite that this study lacks validation of this vaccine construct in terms of its efficacy, the current integrated strategy encompasses the initial multiple epitope vaccine design concepts. After validation, this MVC can be present as a better prophylactic solution against COVID-19.

摘要

导致严重呼吸道感染(新冠肺炎)的2019新型冠状病毒(SARS-CoV-2)疫情已在中国蔓延,世界卫生组织已宣布其为大流行病。然而,目前尚无获批的药物或疫苗,治疗主要是支持性的,并使用一些重新利用的药物。形势紧迫,需要研发基于SARS-CoV-2的疫苗。免疫信息学和分子建模是省时的方法,通常用于加速疫苗开发候选肽的发现和设计。近年来,使用多表位疫苗已被证明是一种针对病毒和病原体的有前景的免疫策略,从而诱导更全面的保护性免疫。当前的研究展示了一种全面的计算机模拟策略,借助佐剂和连接子,从SARS-CoV-2关键蛋白的B细胞和T细胞表位设计稳定的多表位疫苗构建体(MVC)。整合的分子动力学模拟分析揭示了MVC的稳定性及其与人类 Toll 样受体(TLR)的相互作用,后者可触发先天性和适应性免疫反应。随后,在已知的pET28a载体系统中进行的计算机模拟克隆也评估了MVC在……中表达的可能性。尽管这项研究在疫苗构建体的有效性方面缺乏验证,但当前的整合策略涵盖了最初的多表位疫苗设计概念。经过验证后,这种MVC可以作为一种更好的针对新冠肺炎的预防性解决方案。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cd/7563440/acb3bd4ba669/biology-09-00296-g001.jpg

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