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免疫代谢分析指南

A guide to interrogating immunometabolism.

机构信息

Vanderbilt Center for Immunobiology, Department of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN, USA.

Rogel Cancer Center, University of Michigan, Ann Arbor, MI, USA.

出版信息

Nat Rev Immunol. 2021 Oct;21(10):637-652. doi: 10.1038/s41577-021-00529-8. Epub 2021 Apr 15.

Abstract

The metabolic charts memorized in early biochemistry courses, and then later forgotten, have come back to haunt many immunologists with new recognition of the importance of these pathways. Metabolites and the activity of metabolic pathways drive energy production, macromolecule synthesis, intracellular signalling, post-translational modifications and cell survival. Immunologists who identify a metabolic phenotype in their system are often left wondering where to begin and what does it mean? Here, we provide a framework for navigating and selecting the appropriate biochemical techniques to explore immunometabolism. We offer recommendations for initial approaches to develop and test metabolic hypotheses and how to avoid common mistakes. We then discuss how to take things to the next level with metabolomic approaches, such as isotope tracing and genetic approaches. By proposing strategies and evaluating the strengths and weaknesses of different methodologies, we aim to provide insight, note important considerations and discuss ways to avoid common misconceptions. Furthermore, we highlight recent studies demonstrating the power of these metabolic approaches to uncover the role of metabolism in immunology. By following the framework in this Review, neophytes and seasoned investigators alike can venture into the emerging realm of cellular metabolism and immunity with confidence and rigour.

摘要

早期生物化学课程中记住的代谢图表,后来被遗忘了,现在随着人们对这些途径重要性的新认识,又重新回到了许多免疫学家的视野中。代谢物和代谢途径的活性驱动着能量产生、大分子合成、细胞内信号转导、翻译后修饰和细胞存活。在他们的系统中识别出代谢表型的免疫学家常常不知道从哪里开始,也不知道这意味着什么?在这里,我们提供了一个框架,用于探索免疫代谢,并选择适当的生化技术。我们为开发和测试代谢假设的初始方法提供了建议,以及如何避免常见错误。然后,我们讨论了如何通过代谢组学方法(如同位素示踪和遗传方法)将研究推向深入。通过提出策略并评估不同方法的优缺点,我们旨在提供深入的见解,注意重要的考虑因素,并讨论避免常见误解的方法。此外,我们还强调了最近的一些研究,这些研究展示了这些代谢方法在揭示代谢在免疫学中的作用方面的强大功能。通过遵循本综述中的框架,新手和经验丰富的研究人员都可以自信而严谨地涉足细胞代谢和免疫学的新兴领域。

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