Crop Research Institute, Shandong Academy of Agricultural Sciences, Ji'nan, Shandong, P. R. China.
College of Agronomy, Shandong Agricultural University, Tai'an, Shandong, P. R. China.
PLoS One. 2021 Jun 17;16(6):e0253325. doi: 10.1371/journal.pone.0253325. eCollection 2021.
Lysine 2-hydroxyisobutyrylation (Khib) is a recently discovered post-translational modification (PTM) showing diverse biological functions and effects in living organisms. However, the study of Khib in plant species is still relatively limited. Wheat (Triticum aestivum L.) is a global important cereal plant. In this study, the systematic Khib analysis was performed in wheat leave tissues. A total of 3004 Khib sites in 1104 proteins were repeatedly identified. Structure characterization of these Khib peptides revealed 12 conserved sequence motifs. Function classification and enrichment analysis indicated these Khib proteins showed a wide function and pathway distribution, of which ribosome activity, protein biosynthesis and photosynthesis were the preferred biological processes. Subcellular location predication indicated chloroplast was the dominant subcellular compartment where Khib was distributed. There may be some crosstalks among Khib, lysine acetylation and lysine succinylation modification because some proteins and sites were modified by all these three acylations. The present study demonstrated the critical role of Khib in wheat biological and physiology, which has expanded the scope of Khib in plant species. Our study is an available resource and reference of Khib function demonstration and structure characterization in cereal plant, as well as in plant kingdom.
赖氨酸 2-羟基异丁酰化(Khib)是一种新发现的翻译后修饰(PTM),在生物体内具有多种生物学功能和效应。然而,Khib 在植物物种中的研究仍然相对有限。小麦(Triticum aestivum L.)是全球重要的谷类作物。本研究在小麦叶片组织中进行了系统的 Khib 分析。在 1104 种蛋白质中重复鉴定了 3004 个 Khib 位点。对这些 Khib 肽的结构特征分析揭示了 12 个保守序列基序。功能分类和富集分析表明,这些 Khib 蛋白具有广泛的功能和途径分布,其中核糖体活性、蛋白质生物合成和光合作用是首选的生物学过程。亚细胞定位预测表明,叶绿体是 Khib 分布的主要亚细胞区室。Khib、赖氨酸乙酰化和赖氨酸琥珀酰化修饰之间可能存在一些相互作用,因为有些蛋白质和位点被这三种酰化修饰所修饰。本研究表明 Khib 在小麦生物学和生理学中具有重要作用,扩展了 Khib 在植物物种中的范围。我们的研究为谷物植物以及植物界的 Khib 功能证明和结构特征提供了可用的资源和参考。