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在加纳可能传播与B4/H24RxC密切相关的序列型410。

Possible Dissemination of co Sequence Type 410 Closely Related to B4/H24RxC in Ghana.

作者信息

Mahazu Samiratu, Prah Isaac, Ayibieke Alafate, Sato Wakana, Hayashi Takaya, Suzuki Toshihiko, Iwanaga Shiroh, Ablordey Anthony, Saito Ryoichi

机构信息

Department of Molecular Microbiology, Tokyo Medical and Dental University, Tokyo, Japan.

Department of Environmental Parasitology, Tokyo Medical and Dental University, Tokyo, Japan.

出版信息

Front Microbiol. 2021 Dec 1;12:770130. doi: 10.3389/fmicb.2021.770130. eCollection 2021.

Abstract

Extra-intestinal pathogenic (ExPEC) is one of the world's leading causes of bloodstream infections with high mortality. Sequence type 410 (ST410) is an emerging ExPEC clone resistant to a wide range of antibiotics. In this study, we investigated the epidemiology of 21 ST410 isolates from two Ghanaian hospitals. We also investigated the isolates within a global context to provide further insight into the dissemination of this highly pathogenic clone. A phylogenetic tree of the 21 isolate genomes, along with 102 others from global collection, was constructed representing the ensuing clades and sub-clades of the ST: A/H53, B2/H24R, B3/H24Rx, and B4/H24RxC. The carbapenem-resistant sub-clade B4/H24RxC is reported to have emerged in the early 2000s when ST410 acquired an IncX3 plasmid carrying a carbapenemase gene, and a second carbapenemase gene, , on a conserved IncFII plasmid in 2014. We identified, in this study, one -carrying isolate belonging to B4/H24RxC sub-lineage and one carrying belonging to sub-lineage B3/H24Rx. The gene was found on a 51kb IncX3 plasmid; pEc1079_3. The majority (12/21) of our Ghanaian isolates were clustered with international strains described by previous authors as closely related strains to B4/H24RxC. Six others were clustered among the ESBL-associated sub-lineage B3/H24Rx and three with the globally disseminated sub-lineage B4/H24RxC. The results show that this highly pathogenic clone is disseminated in Ghana and, given its ability to transmit between hosts, it poses a serious threat and should be monitored closely.

摘要

肠外致病性大肠杆菌(ExPEC)是全球血流感染的主要病因之一,死亡率很高。序列型410(ST410)是一种新出现的对多种抗生素耐药的ExPEC克隆。在本研究中,我们调查了来自加纳两家医院的21株ST410分离株的流行病学情况。我们还在全球范围内对这些分离株进行了调查,以进一步了解这种高致病性克隆的传播情况。构建了21株分离株基因组的系统发育树,以及来自全球收集的另外102株,代表了ST的后续分支和亚分支:A/H53、B2/H24R、B3/H24Rx和B4/H24RxC。据报道,耐碳青霉烯类的亚分支B4/H24RxC在21世纪初出现,当时ST410获得了携带碳青霉烯酶基因的IncX3质粒,并于2014年在一个保守的IncFII质粒上获得了第二个碳青霉烯酶基因。在本研究中,我们鉴定出一株属于B4/H24RxC亚谱系的携带 的分离株和一株属于B3/H24Rx亚谱系的携带 的分离株。 基因位于一个51kb的IncX3质粒上;pEc1079_3。我们的加纳分离株中,大多数(12/21)与先前作者描述的与B4/H24RxC密切相关的国际菌株聚集在一起。另外6株聚集在与ESBL相关的亚谱系B3/H24Rx中,3株与全球传播的亚谱系B4/H24RxC聚集在一起。结果表明,这种高致病性克隆在加纳传播,鉴于其在宿主之间传播的能力,它构成了严重威胁,应密切监测。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0004/8672054/d24b18ad8fa7/fmicb-12-770130-g001.jpg

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