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分析 Zeste 增强子同源物 2(EZH2)mRNA 表达与间皮瘤患者预后和免疫浸润的相关性。

Analysis of the correlation between Zeste enhancer homolog 2 (EZH2) mRNA expression and the prognosis of mesothelioma patients and immune infiltration.

机构信息

Department of Radiation Oncology, Hebei Province Cangzhou Hospital of Integrated Traditional and Western Medicine, No. 31, Huanghe West Road, Yunhe District, Cangzhou, 061000, Hebei, China.

Guang'anmen Hospital, China Academy of Chinese Medical Sciences, Beijing, 100053, China.

出版信息

Sci Rep. 2022 Oct 4;12(1):16583. doi: 10.1038/s41598-022-21005-w.

Abstract

Mesothelioma lies one of the most malignant tumors, in which the identification of the corresponding biomarkers is extremely critical. This study aims to investigate the prognostic value of enhancer homolog 2 (EZH2) mRNA expression in mesothelioma patients accompanied with its immune infiltration analysis. Gene expression, clinical information and enrichment analysis were obtained based on the Cancer Genome Atlas (TCGA), the immune infiltration analysis and bioinformatics analysis were performed. Clinical information and gene expression were obtained from 86 patients with mesothelioma based on TCGA database. Survival analysis, GSEA enrichment analysis, and immune infiltration analysis of EZH2 expression were carried out using R (version 3.6.3) (statistical analysis and visualization). The correlation of EZH2 expression with immune cell infiltration in mesothelioma was analyzed according to the TIMER database (Fig. https://cistrome.shinyapps.io/timer/ ). A univariate and multivariate analysis of general data obtained from the TCGA database was performed, involving age, gender, stage, pathological type, and whether they had received radiotherapy, the results indicated the association of high expression of EZH2 with poor prognosis in mesothelioma patients, with the worse prognosis in the High group (HR = 2.75, 95% CI 1.68-4.52, P < 0.010). Moreover, ROC curves showed that EZH2 expression predicted 1-year survival with an AUC of 0.740, 2-year survival with an AUC of 0.756, and 3-year survival with an AUC of 0.692, suggesting a robust predictive effect of EZH2 expression on prognosis. KEGG pathway analysis indicated five pathways showing the strongest positive correlation with EZH2 expression: cell cycle, DNA replication, Cell adhesion molecules cams, Primary immuno deficiency, Tsate transduction, and five pathways showing the strongest negative correlation with EZH2 expression: Glycolysis gluconeogenesis, Drug metabolism, cytochrome P450, retinol metabolism, fatty acid metabolism ribosome. We investigated the correlation between EZH2 expression and the level of immune infiltration in mesothelioma tissues. The results indicated that EZH2 expression played a critical role in immune infiltration, of which the high expression was correlated with the reduced number of NK cells, Mast cells, and Th17 cells. Moreover, mesothelioma patients with high EZH2 expression differ from those with low EZH2 expression in their tumor immune microenvironment. EZH2, as a new prognostic biomarker for mesothelioma, contributes to elucidating how changes in the immune environment promote the development of mesothelioma. Further analysis, EZH2 may serve as a biological test to predict the prognosis of mesothelioma.

摘要

间皮瘤是最恶性的肿瘤之一,其中相应的生物标志物的鉴定是极其关键的。本研究旨在探讨增强子同源物 2(EZH2)mRNA 表达在伴有免疫浸润分析的间皮瘤患者中的预后价值。基于癌症基因组图谱(TCGA)获得基因表达、临床信息和富集分析,进行免疫浸润分析和生物信息学分析。从 TCGA 数据库中获得 86 例间皮瘤患者的临床信息和基因表达。使用 R(版本 3.6.3)(统计分析和可视化)进行 EZH2 表达的生存分析、GSEA 富集分析和免疫浸润分析。根据 TIMER 数据库(图 https://cistrome.shinyapps.io/timer/ )分析 EZH2 表达与间皮瘤中免疫细胞浸润的相关性。根据 TCGA 数据库获得的一般数据进行单因素和多因素分析,包括年龄、性别、分期、病理类型以及是否接受过放疗,结果表明 EZH2 高表达与间皮瘤患者预后不良相关,High 组预后更差(HR=2.75,95%CI 1.68-4.52,P<0.010)。此外,ROC 曲线显示,EZH2 表达可预测 1 年生存率,AUC 为 0.740,预测 2 年生存率,AUC 为 0.756,预测 3 年生存率,AUC 为 0.692,表明 EZH2 表达对预后具有稳健的预测作用。KEGG 通路分析表明,与 EZH2 表达相关性最强的五个通路:细胞周期、DNA 复制、细胞黏附分子 cams、原发性免疫缺陷、信号转导,与 EZH2 表达相关性最强的五个通路:糖酵解糖异生、药物代谢、细胞色素 P450、视黄醇代谢、脂肪酸代谢核糖体。我们研究了 EZH2 表达与间皮瘤组织中免疫浸润水平的相关性。结果表明,EZH2 表达在免疫浸润中起关键作用,高表达与 NK 细胞、肥大细胞和 Th17 细胞数量减少有关。此外,EZH2 高表达的间皮瘤患者与 EZH2 低表达的间皮瘤患者在肿瘤免疫微环境方面存在差异。EZH2 作为间皮瘤的新预后生物标志物,有助于阐明免疫环境的变化如何促进间皮瘤的发展。进一步分析,EZH2 可能作为生物检测手段,预测间皮瘤的预后。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c962/9532413/d6fd0e8121e5/41598_2022_21005_Fig1_HTML.jpg

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