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用于抗神经退行性疾病药物开发的石蒜(L.) Wettst. 化合物的计算分析

Computational Analysis of (L.) Wettst. Compounds for Drug Development against Neurodegenerative Disorders.

作者信息

Sangeet Satyam, Khan Arshad, Mahanta Saurov, Roy Nabamita, Das Sanjib Kumar, Mohanta Yugal Kishore, Saravanan Muthupandian, Tag Hui, Hui Pallabi Kalita

机构信息

Department of Biological Science and Engineering, Maulana Azad National Institute of Technology, Bhopal, Madhya Pradesh, 462033, India.

Department of Biotechnology, National Institute of Technology (NIT) Arunachal Pradesh, Yupia, 79112, Arunachal Pradesh, India.

出版信息

Curr Comput Aided Drug Des. 2023;19(1):24-36. doi: 10.2174/1573409918666221010103652.

Abstract

AIM

With several experimental studies establishing the role of Bacopa monnieri as an effective neurological medication, less focus has been employed to explore how effectively Bacopa monnieri brings about this property. The current work focuses on understanding the molecular interaction of the phytochemicals of the plant against different neurotrophic factors to explore their role and potential as potent anti-neurodegenerative drugs.

BACKGROUND

Neurotrophins play a crucial role in the development and regulation of neurons. Alterations in the functioning of these Neurotrophins lead to several Neurodegenerative Disorders. Albeit engineered medications are accessible for the treatment of Neurodegenerative Disorders, due to their numerous side effects, it becomes imperative to formulate and synthesize novel drug candidates.

OBJECTIVE

This study aims to investigate the potential of Bacopa monnieri phytochemicals as potent antineurodegenerative drugs by inspecting the interactions between Neurotrophins and target proteins.

METHODS

The current study employs molecular docking and molecular dynamic simulation studies to examine the molecular interactions of phytochemicals with respective Neurotrophins. Further inspection of the screened phytochemicals was performed to analyze the ADME-Tox properties in order to classify the screened phytochemicals as potent drug candidates.

RESULTS

The phytochemicals of Bacopa monnieri were subjected to in-silico docking with the respective Neurotrophins. Vitamin E, Benzene propanoic acid, 3,5-bis (1,1- dimethylethyl)- 4hydroxy-, methyl ester (BPA), Stigmasterol, and Nonacosane showed an excellent binding affinity with their respective Neurotrophins (BDNF, NT3, NT4, NGF). Moreover, the molecular dynamic simulation studies revealed that BPA and Stigmasterol show a very stable interaction with NT3 and NT4, respectively, suggesting their potential role as a drug candidate. Nonacosane exhibited a fluctuating binding behavior with NGF which can be accounted for by its long linear structure. ADME-Tox studies further confirmed the potency of these phytochemicals as BPA violated no factors and Vitamin E, Stigmasterol and Nonacosane violated 1 factor for Lipinski's rule. Moreover, their high human intestinal absorption and bioavailability score along with their classification as non-mutagen in the Ames test makes these compounds more reliable as potent antineurodegenerative drugs.

CONCLUSION

Our study provides an in-silico approach toward understanding the anti-neurodegenerative property of Bacopa monnieri phytochemicals and establishes the role of four major phytochemicals which can be utilized as a replacement for synthetic drugs against several neurodegenerative disorders.

摘要

目的

多项实验研究证实了假马齿苋作为一种有效的神经药物的作用,但较少关注假马齿苋如何有效发挥这一特性。当前的研究重点是了解该植物的植物化学成分与不同神经营养因子之间的分子相互作用,以探索它们作为强效抗神经退行性疾病药物的作用和潜力。

背景

神经营养因子在神经元的发育和调节中起着至关重要的作用。这些神经营养因子功能的改变会导致多种神经退行性疾病。尽管有工程药物可用于治疗神经退行性疾病,但由于其众多副作用,开发和合成新型候选药物变得势在必行。

目的

本研究旨在通过研究神经营养因子与靶蛋白之间的相互作用,本研究旨在探究假马齿苋植物化学成分作为强效抗神经退行性疾病药物的潜力。

方法

本研究采用分子对接和分子动力学模拟研究来检查植物化学成分与各自神经营养因子的分子相互作用。对筛选出的植物化学成分进行进一步检查,以分析其药代动力学性质,以便将筛选出的植物化学成分归类为强效候选药物。

结果

假马齿苋的植物化学成分与各自的神经营养因子进行了虚拟对接。维生素E、苯丙酸、3,5-双(1,1-二甲基乙基)-4-羟基-甲酯(BPA)、豆甾醇和二十九烷与其各自的神经营养因子(脑源性神经营养因子、神经营养因子3、神经营养因子4、神经生长因子)表现出优异的结合亲和力。此外,分子动力学模拟研究表明,BPA和豆甾醇分别与神经营养因子3和神经营养因子4表现出非常稳定的相互作用,表明它们作为候选药物的潜在作用。二十九烷与神经生长因子表现出波动的结合行为,这可以由其长线性结构来解释。药代动力学研究进一步证实了这些植物化学成分的效力,因为BPA未违反任何因素,维生素E、豆甾醇和二十九烷违反了Lipinski规则的1个因素。此外,它们较高的人体肠道吸收和生物利用度评分,以及在Ames试验中被归类为非诱变剂,使得这些化合物作为强效抗神经退行性疾病药物更可靠。

结论

我们的研究提供了一种虚拟方法来理解假马齿苋植物化学成分的抗神经退行性特性,并确定了四种主要植物化学成分的作用,它们可作为合成药物的替代品用于治疗多种神经退行性疾病。

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