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血浆环状 RNA 谱可区分阿尔茨海默病和轻度认知障碍患者与健康对照者。

A Plasma Circular RNA Profile Differentiates Subjects with Alzheimer's Disease and Mild Cognitive Impairment from Healthy Controls.

机构信息

Department of Neuroscience, Istituto Superiore di Sanità, 00161 Rome, RM, Italy.

EBRI Rita Levi-Montalcini Foundation, 00161 Rome, RM, Italy.

出版信息

Int J Mol Sci. 2022 Oct 31;23(21):13232. doi: 10.3390/ijms232113232.

Abstract

The most frequently used biomarkers to support the diagnosis of Alzheimer’s Disease (AD) are Aβ42, total-Tau, and phospho-tau protein levels in CSF. Moreover, magnetic resonance imaging is used to assess hippocampal atrophy, 18F-FDG PET to identify abnormal brain metabolism, and PET imaging for amyloid deposition. These tests are rather complex and invasive and not easily applicable to clinical practice. Circulating non-coding RNAs, which are inherently stable and easy to manage, have been reported as promising biomarkers for central nervous system conditions. Recently, circular RNAs (circRNAs) as a novel class of ncRNAs have gained attention. We carried out a pilot study on five participants with AD and five healthy controls (HC) investigating circRNAs by Arraystar Human Circular RNA Microarray V2.0. Among them, 26 circRNAs were differentially expressed (FC ≥ 1.5, p < 0.05) in participants with AD compared to HC. From a top 10 of differentially expressed circRNAs, a validation study was carried out on four up-regulated (hsa_circRNA_050263, hsa_circRNA_403959, hsa_circRNA_003022, hsa_circRNA_100837) and two down-regulated (hsa_circRNA_102049, hsa_circRNA_102619) circRNAs in a larger population. Moreover, five subjects with mild cognitive impairment (MCI) were investigated. The analysis confirmed the upregulation of hsa_circRNA_050263, hsa_circRNA_403959, and hsa_circRNA_003022 both in subjects with AD and in MCI compared to HCs. We also investigated all microRNAs potentially interacting with the studied circRNAs. The GO enrichment analysis shows they are involved in the development of the nervous system, and in the cellular response to nerve growth factor stimuli, protein phosphorylation, apoptotic processes, and inflammation pathways, all of which are processes related to the pathology of AD.

摘要

用于支持阿尔茨海默病(AD)诊断的最常用生物标志物是 CSF 中的 Aβ42、总 Tau 和磷酸化 Tau 蛋白水平。此外,磁共振成像用于评估海马萎缩,18F-FDG PET 用于识别异常脑代谢,PET 成像用于淀粉样蛋白沉积。这些测试相当复杂和具有侵入性,不易应用于临床实践。循环非编码 RNA 作为一种新型的 ncRNA ,因其内在稳定性和易于管理而被报道为中枢神经系统疾病的有前途的生物标志物。最近,环状 RNA(circRNA)作为一种新型的 ncRNA 引起了人们的关注。我们对 5 名 AD 患者和 5 名健康对照者(HC)进行了一项先导研究,通过 Arraystar Human Circular RNA Microarray V2.0 研究 circRNA。其中,与 HC 相比,AD 患者有 26 个 circRNA 表达差异(FC≥1.5,p<0.05)。在 top10 差异表达的 circRNA 中,对 4 个上调(hsa_circRNA_050263、hsa_circRNA_403959、hsa_circRNA_003022、hsa_circRNA_100837)和 2 个下调(hsa_circRNA_102049、hsa_circRNA_102619)的 circRNA 进行了更大人群的验证研究。此外,还对 5 名轻度认知障碍(MCI)患者进行了研究。分析证实,与 HC 相比,AD 和 MCI 患者的 hsa_circRNA_050263、hsa_circRNA_403959 和 hsa_circRNA_003022 均上调。我们还研究了所有可能与研究的 circRNA 相互作用的 microRNA。GO 富集分析表明,它们参与了神经系统的发育,以及对神经生长因子刺激的细胞反应、蛋白质磷酸化、凋亡过程和炎症途径,所有这些过程都与 AD 的病理学有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c43c/9658433/ba4ab4248767/ijms-23-13232-g001.jpg

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