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人LECT2淀粉样纤维的冷冻电镜结构揭示其核心存在极性梯子网络。

Cryo-EM Structure of a Human LECT2 Amyloid Fibril Reveals a Network of Polar Ladders at its Core.

作者信息

Richards Logan S, Flores Maria D, Zink Samantha, Schibrowsky Natalie A, Sawaya Michael R, Rodriguez Jose A

机构信息

Department of Chemistry and Biochemistry; UCLA-DOE Institute for Genomics and Proteomics; STROBE, NSF Science and Technology Center; University of California, Los Angeles (UCLA); Los Angeles, CA 90095, USA.

出版信息

bioRxiv. 2023 Feb 11:2023.02.08.527771. doi: 10.1101/2023.02.08.527771.

Abstract

ALECT2 is a type of systemic amyloidosis caused by deposition of the leukocyte cell-derived chemotaxin-2 (LECT2) protein in the form of fibrils. In ALECT2, LECT2 fibril deposits can be found in the glomerulus, resulting in renal failure. Affected patients lack effective treatment options outside of renal transplant or dialysis. While the structure of LECT2 in its globular form has been determined by X-ray crystallography, structures of LECT2 amyloid fibrils remain unknown. Using single particle cryo-EM, we now find that human LECT2 forms robust twisting fibrils with canonical amyloid features. At their core, LECT2 fibrils contain two mating protofilaments, the ordered core of each protofilament spans residues 55-75 of the LECT2 sequence. The overall geometry of the LECT2 fibril displays features in line with other pathogenic amyloids. Its core is tightly packed and stabilized by a network of hydrophobic contacts and hydrogen-bonded uncharged polar residues, while its outer surface displays several charged residues. The robustness of LECT2 fibril cores is illustrated by their limited dissolution in 3M urea and their persistence after treatment with proteinase K. As such, the LECT2 fibril structure presents a potential new target for treatments against ALECT2.

摘要

白细胞衍生趋化因子2(LECT2)淀粉样变性(ALECT2)是一种系统性淀粉样变性,由LECT2蛋白以原纤维形式沉积所致。在ALECT2中,LECT2原纤维沉积物可在肾小球中发现,导致肾衰竭。除肾移植或透析外,受影响的患者缺乏有效的治疗选择。虽然LECT2球状形式的结构已通过X射线晶体学确定,但LECT2淀粉样原纤维的结构仍然未知。使用单颗粒冷冻电镜,我们现在发现人LECT2形成具有典型淀粉样特征的坚固扭曲原纤维。在其核心,LECT2原纤维包含两条配对的原丝,每条原丝的有序核心跨越LECT2序列的55-75位残基。LECT2原纤维的整体几何形状显示出与其他致病性淀粉样蛋白一致的特征。其核心紧密堆积,并通过疏水接触网络和氢键连接的不带电极性残基得以稳定,而其外表面则显示出几个带电荷的残基。LECT2原纤维核心的坚固性体现在它们在3M尿素中的有限溶解性以及用蛋白酶K处理后的持久性。因此,LECT2原纤维结构为抗ALECT2治疗提供了一个潜在的新靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/93c2/9934627/e7ff2917c283/nihpp-2023.02.08.527771v1-f0001.jpg

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