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小 RNA 和降解组测序揭示了 miRNA 在花休眠释放中的作用。

Small RNA and Degradome Sequencing in Floral Bud Reveal Roles of miRNAs in Dormancy Release of .

机构信息

Chongqing Engineering Research Center for Floriculture, Key Laboratory of Horticulture Science for Southern Mountainous Regions of Ministry of Education, College of Horticulture and Landscape Architecture, Southwest University, Chongqing 400715, China.

出版信息

Int J Mol Sci. 2023 Feb 20;24(4):4210. doi: 10.3390/ijms24044210.

Abstract

(wintersweet) is highly valued ornamentally and economically. Floral bud dormancy is an important biological characteristic in the life cycle of wintersweet, and a certain period of chilling accumulation is necessary for breaking floral bud dormancy. Understanding the mechanism of floral bud dormancy release is essential for developing measures against the effects of global warming. miRNAs play important roles in low-temperature regulation of flower bud dormancy through mechanisms that are unclear. In this study, small RNA and degradome sequencing were performed for wintersweet floral buds in dormancy and break stages for the first time. Small RNA sequencing identified 862 known and 402 novel miRNAs; 23 differentially expressed miRNAs (10 known and 13 novel) were screened via comparative analysis of breaking and other dormant floral bud samples. Degradome sequencing identified 1707 target genes of 21 differentially expressed miRNAs. The annotations of the predicted target genes showed that these miRNAs were mainly involved in the regulation of phytohormone metabolism and signal transduction, epigenetic modification, transcription factors, amino acid metabolism, and stress response, etc., during the dormancy release of wintersweet floral buds. These data provide an important foundation for further research on the mechanism of floral bud dormancy in wintersweet.

摘要

(腊梅)具有很高的观赏价值和经济价值。花芽休眠是腊梅生命周期中的一个重要生物学特性,打破花芽休眠需要一定时期的低温积累。了解花芽休眠解除的机制对于制定应对全球变暖影响的措施至关重要。miRNAs 通过尚不清楚的机制在低温调控花芽休眠中发挥重要作用。本研究首次对休眠和解除休眠阶段的腊梅花芽进行了小 RNA 和降解组测序。小 RNA 测序鉴定出 862 个已知和 402 个新的 miRNAs;通过对解除休眠和其他休眠花芽样本的比较分析,筛选出 23 个差异表达的 miRNAs(10 个已知和 13 个新)。降解组测序鉴定出 21 个差异表达 miRNAs 的 1707 个靶基因。预测靶基因的注释表明,这些 miRNAs 主要参与腊梅花芽休眠解除过程中植物激素代谢和信号转导、表观遗传修饰、转录因子、氨基酸代谢和应激反应等的调控。这些数据为进一步研究腊梅花芽休眠机制提供了重要基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d3cb/9964840/6dc533031a0c/ijms-24-04210-g003.jpg

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