Hu Gaowu, Chen Wenquan, Peng Wei, Cao Yongqing
Department of Anorectal Medicine, Shanghai Traditional Chinese and Western Medicine Integrated Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Floor 9, Building 5, No. 303, Changyang Road, Hongkou District, Shanghai, China.
Department of Anorectal Medicine, Longhua Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, 725 Wanping South Road, Shanghai, China.
J Oncol. 2023 Feb 24;2023:7671917. doi: 10.1155/2023/7671917. eCollection 2023.
LINC01207 expression is associated with colorectal cancer progression. However, the exact role of LINC01207 in colorectal cancer (CRC) is not clear, and further exploration is needed.
Gene expression data of the GSE34053 database were used to explore the differential expressed genes (DEGs) between colon cancer cells and normal cells. The gene expression profiling interactive analysis (GEPIA) was used to determine the differential expression of LINC01207 between CRC and normal tissues and the association between the expression of LINC01207 and survival in patients with CRC. The Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) analysis were performed to obtain the biological processes and pathways associated with DEGs and LINC01207 coexpressed genes in CRC. The qRT-PCR was used to determine the LINC01207 level in CRC cell lines and tissue samples. CCK-8 assay was employed to measure cell viability and Transwell assay to assess cell invasion and migration.
In this study, a total of 954 DEGs were identified, including 282 upregulated and 672 downregulated genes. LINC01207 was significantly upregulated in CRC samples with a poor prognosis. LINC01207 was also associated with pathways such as ECM-receptor interaction, O-glycan processing, and TNF signaling pathway in CRC. Knockdown of LINC01207 inhibited the migration, invasion, and proliferation of CRC cells.
LINC01207 might act as an oncogene and promote the progression of CRC. Our study suggested that LINC01207 had the potential to be a novel biomarker for CRC detection and a therapeutic target for CRC treatment.
LINC01207的表达与结直肠癌进展相关。然而,LINC01207在结直肠癌(CRC)中的确切作用尚不清楚,需要进一步探索。
利用GSE34053数据库的基因表达数据来探索结肠癌细胞与正常细胞之间的差异表达基因(DEGs)。使用基因表达谱交互式分析(GEPIA)来确定CRC与正常组织之间LINC01207的差异表达以及LINC01207表达与CRC患者生存的相关性。进行京都基因与基因组百科全书(KEGG)和基因本体论(GO)分析以获得与CRC中DEGs和LINC01207共表达基因相关的生物学过程和途径。采用qRT-PCR来确定CRC细胞系和组织样本中的LINC01207水平。使用CCK-8法测量细胞活力,使用Transwell法评估细胞侵袭和迁移。
在本研究中,共鉴定出954个DEGs,包括282个上调基因和672个下调基因。LINC01207在预后不良的CRC样本中显著上调。LINC01207还与CRC中的细胞外基质-受体相互作用、O-聚糖加工和TNF信号通路等途径相关。敲低LINC01207可抑制CRC细胞的迁移、侵袭和增殖。
LINC01207可能作为一种癌基因并促进CRC的进展。我们的研究表明,LINC01207有潜力成为CRC检测的新型生物标志物和CRC治疗的靶点。