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转录组分析为了解根系对低磷胁迫的反应提供了见解。

Transcriptome analysis provides insights into the response of roots to low-phosphorus stress.

作者信息

Zhao Xin, Chen Ke-Ke, Wang Lei-Ting, Zhao Li-Li, Wang Pu-Chang

机构信息

College of Animal Science, Guizhou University, Guiyang, China.

School of Life Sciences, Guizhou Normal University, Guiyang, China.

出版信息

Front Plant Sci. 2023 Mar 1;14:1089380. doi: 10.3389/fpls.2023.1089380. eCollection 2023.

Abstract

INTRODUCTION

A lack of soil phosphorus (P) is a principal factor restricting the normal growth of in the karst area of Guizhou Province, China, but the response mechanism of under low-phosphorus stress remains unclear.

METHODS

Therefore, we treated two selected lines (low-P-intolerant line 08518 and low-P-tolerant line 01549) from 13 lines with normal phosphorus (0.5 mmol/L KHPO, NP) and low phosphorus (0.005 mmol/L KHPO, LP) concentrations to study changes in morphological, physiological and transcriptome data under low-phosphorus stress.

RESULTS

The low-P-tolerant line 01549 exhibited better performance under low-phosphorus stress. Compared with the NP treatment, all root morphological indicators of the low-P-tolerant line 01549 increased, and those of the low-P-intolerant line 08518 decreased under low-P stress. Compared with the NP treatment, acid phosphatase (ACP), catalase (CAT), superoxide dismutase (SOD), and peroxidase (POD) activities, and the malondialdehyde (MDA), soluble sugar (SS), soluble protein (SP) and proline (Pro) contents of the two lines increased under low-P stress. A transcriptome analysis of showed that a total of 656 and 2243 differentially expressed genes (DEGs) were identified in line 01549 and line 08518, respectively. Meanwhile, the main pathways, such as carbohydrate metabolism, acid phosphatases, phosphate transporters and biosynthesis of secondary metabolites, as well as related genes were also screened by performing a KEGG enrichment analysis.

DISCUSSION

The findings provide an essential point of reference for studying the physiological and molecular mechanism of the response to low-P stress in .

摘要

引言

土壤磷素缺乏是限制中国贵州省喀斯特地区[植物名称未给出]正常生长的主要因素,但[植物名称未给出]在低磷胁迫下的响应机制仍不清楚。

方法

因此,我们用正常磷浓度(0.5 mmol/L KH₂PO₄,NP)和低磷浓度(0.005 mmol/L KH₂PO₄,LP)处理从13个[植物名称未给出]品系中选出的两个品系(低磷不耐受品系08518和低磷耐受品系01549),以研究低磷胁迫下形态、生理和转录组数据的变化。

结果

低磷耐受品系01549在低磷胁迫下表现出更好的性能。与NP处理相比,低磷耐受品系01549的所有根系形态指标均增加,而低磷不耐受品系08518的根系形态指标在低磷胁迫下下降。与NP处理相比,两个[植物名称未给出]品系的酸性磷酸酶(ACP)、过氧化氢酶(CAT)、超氧化物歧化酶(SOD)和过氧化物酶(POD)活性,以及丙二醛(MDA)、可溶性糖(SS)、可溶性蛋白(SP)和脯氨酸(Pro)含量在低磷胁迫下均增加。对[植物名称未给出]的转录组分析表明,在品系01549和品系08518中分别鉴定出656个和2243个差异表达基因(DEG)。同时,通过进行KEGG富集分析,还筛选出了碳水化合物代谢、酸性磷酸酶、磷转运体和次生代谢物生物合成等主要途径以及相关基因。

讨论

这些发现为研究[植物名称未给出]对低磷胁迫响应的生理和分子机制提供了重要参考点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/30b1/10014540/ee9d5cbc0172/fpls-14-1089380-g001.jpg

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