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全基因组关联和糖尿病视网膜病变的确认性荟萃分析。

Genome-Wide Associations and Confirmatory Meta-Analyses in Diabetic Retinopathy.

机构信息

Department of Medicine, Brigham and Women's Hospital, Mass General Brigham, Harvard Medical School, Boston, MA 02445, USA.

Department of Ophthalmology, Massachusetts Eye and Ear, Mass General Brigham, Harvard Medical School, Boston, MA 02445, USA.

出版信息

Genes (Basel). 2023 Mar 5;14(3):653. doi: 10.3390/genes14030653.

Abstract

The present study aimed to summarize and validate the genomic association signals for diabetic retinopathy (DR), proliferative DR, and diabetic macular edema/diabetic maculopathy. A systematic search of the genome-wide association study (GWAS) catalog and PubMed/MELINE databases was conducted to curate a comprehensive list of significant GWAS discoveries. The top signals were then subjected to meta-analysis using established protocols. The results indicate the need for improved consensus among DR GWASs, highlighting the importance of validation efforts. A subsequent meta-analysis confirmed the association of two SNPs, rs4462262 () (odds ratio = 1.38, = 0.001) and rs7903146 () (odd ratio = 1.30, < 0.001), with DR in independent populations, strengthening the evidence of their true association. We also compiled a list of candidate SNPs for further validation. This study highlights the importance of consistent validation and replication efforts in the field of DR genetics. The two identified gene loci warrant further functional investigation to understand their role in DR pathogenesis.

摘要

本研究旨在总结和验证与糖尿病视网膜病变(DR)、增殖性 DR 和糖尿病性黄斑水肿/糖尿病性黄斑病变相关的基因组关联信号。通过对全基因组关联研究(GWAS)目录和 PubMed/MELINE 数据库进行系统搜索,整理出一份全面的重要 GWAS 发现清单。然后,使用既定方案对顶级信号进行荟萃分析。结果表明需要提高 DR GWAS 之间的共识,突出了验证工作的重要性。随后的荟萃分析证实了两个 SNP(rs4462262()和 rs7903146())与独立人群中 DR 的关联(比值比 = 1.38, = 0.001 和比值比 = 1.30, < 0.001),增强了其真实关联的证据。我们还编制了候选 SNP 列表,供进一步验证。本研究强调了在 DR 遗传学领域进行一致验证和复制工作的重要性。这两个确定的基因座值得进一步进行功能研究,以了解它们在 DR 发病机制中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8f9e/10048213/0bdc7a510070/genes-14-00653-g001.jpg

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