Ibrahim Mohamed I A, Solimando Xavier, Stefan Loïc, Pickaert Guillaume, Babin Jérôme, Arnal-Herault Carole, Roizard Denis, Jonquières Anne, Bodiguel Jacques, Averlant-Petit Marie-Christine
Université de Lorraine, CNRS, LCPM F-54000 Nancy France
National Institute of Oceanography and Fisheries, NIOF Egypt
RSC Adv. 2023 Mar 29;13(15):10051-10067. doi: 10.1039/d3ra00409k. eCollection 2023 Mar 27.
The current study presents for the first time the synthesis of a new 2:1-[α/aza]-pseudopeptide series possessing charged amino acids (, lysine) and aims at studying the influences of chirality, backbone length, and the nature of the lysine side chains on the conformation of the 2:1-[α/aza]-oligomers in solution using NMR, FTIR spectroscopy and molecular dynamic calculations. The spectroscopic results emphasized the conservation of the β-turn conformation adopted by the trimers regardless of the chirality which demonstrated a noticeable effect on the conformation of homochiral hexamer (8c) compared with the hetero-analogue (8d). The molecular dynamic calculations predicted that the chirality and the side chain of the lysine residues caused a little distortion from the classical β-turn conformation in the case of short trimer sequences (7c and 7d), while the chirality and the backbone length exerted more distortion on the β-turn adopted by the longer hexamer sequences (8c and 8d). The large disturbance in hexamers from classical β-turn was attributed to increasing the flexibility and the possibility of molecules to adopt a more energetically favorable conformation stabilized by non-classical β-turn intramolecular hydrogen bonds. Thus, alternating d- and l-lysine amino acids in the 2:1-[α/aza]-hexamer (8d) decreases the high steric hindrance between the lysine side chains, as in the homo analogue (8c), and the distortion is less recognized. Finally, short sequences of aza-pseudopeptides containing lysine residues improve CO separation when used as additives in Pebax® 1074 membranes. The best membrane performances were obtained with a pseudopeptidic dimer as an additive (6b'; deprotected lysine side chain), with an increase in both ideal selectivity (from 42.8 to 47.6) and CO permeability (from 132 to 148 Barrer) compared to the virgin Pebax® 1074 membrane.
本研究首次展示了一种新的2:1-[α/氮杂]-假肽系列的合成,该系列含有带电荷的氨基酸(赖氨酸),旨在利用核磁共振、傅里叶变换红外光谱和分子动力学计算,研究手性、主链长度以及赖氨酸侧链性质对溶液中2:1-[α/氮杂]-低聚物构象的影响。光谱结果强调,三聚体所采用的β-转角构象具有保守性,无论手性如何,与杂合类似物(8d)相比,手性对同手性六聚体(8c)的构象有显著影响。分子动力学计算预测,在短三聚体序列(7c和7d)的情况下,赖氨酸残基的手性和侧链会导致与经典β-转角构象略有偏差,而手性和主链长度对较长六聚体序列(8c和8d)所采用的β-转角产生的偏差更大。六聚体与经典β-转角的较大偏差归因于分子灵活性的增加以及分子通过非经典β-转角分子内氢键形成更具能量优势构象的可能性。因此,在2:1-[α/氮杂]-六聚体(8d)中交替使用d-和l-赖氨酸氨基酸,可降低赖氨酸侧链之间的高空间位阻,如同在同手性类似物(8c)中一样,且偏差不太明显。最后,含有赖氨酸残基的氮杂假肽短序列在用作Pebax® 1074膜的添加剂时可改善CO分离。与原始的Pebax® 1074膜相比,使用假肽二聚体作为添加剂(6b';脱保护的赖氨酸侧链)可获得最佳的膜性能,理想选择性(从42.8提高到47.6)和CO渗透率(从132提高到148 Barrer)均有所增加。