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从叶提取物中筛选和鉴定与登革热相关血小板减少症相关的潜在类药性化合物。

screening and identification of potential drug-like compounds for dengue-associated thrombocytopenia from leaf extracts.

机构信息

Centre for Integrative Omics Data Science, Yenepoya (Deemed to be University), Mangalore, India.

Centre for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to Be University), Mangalore, India.

出版信息

J Biomol Struct Dyn. 2024 Jul;42(11):5963-5981. doi: 10.1080/07391102.2023.2230293. Epub 2023 Jul 2.

Abstract

Dengue virus is a mosquito-borne pathogen that causes a variety of illnesses ranging from mild fever to severe and fatal dengue haemorrhagic fever or dengue shock syndrome. One of the major clinical manifestations of severe dengue infection is thrombocytopenia. The dengue non-structural protein 1 (NS1) is the primary protein that stimulates immune cells via toll-like receptor 4 (TLR4), induces platelets, and promotes aggregation, which could result in thrombocytopenia. The leaf extracts of seem to have therapeutic benefits in managing thrombocytopenia associated with dengue. The present study focuses on understanding the underlying mechanism of the use of papaya leaf extracts in treating thrombocytopenia. We have identified 124 phytocompounds that are present in the papaya leaf extract. The pharmacokinetics, molecular docking, binding free energy calculations, and molecular dynamic simulations were performed to investigate the drug-like properties, binding affinities, and interaction of phytocompounds with NS1 protein as well as the interactions of NS1 with TLR4. Three phytocompounds were found to bind with the ASN130, a crucial amino acid residue in the active site of the NS1 protein. Thus, we conclude that Rutin, Myricetin 3-rhamnoside, or Kaempferol 3-(2''-rhamnosylrutinoside) may serve as promising molecules by ameliorating thrombocytopenia in dengue-infected patients by interfering the interaction of NS1 with TLR4. These molecules can serve as drugs in the management of dengue-associated thrombocytopenia after verifying their effectiveness and assessing the drug potency, through additional in-vitro assays.Communicated by Ramaswamy H. Sarma.

摘要

登革热病毒是一种通过蚊子传播的病原体,可引起从轻度发热到严重和致命的登革出血热或登革休克综合征等多种疾病。严重登革热感染的主要临床表现之一是血小板减少症。登革非结构蛋白 1(NS1)是通过 Toll 样受体 4(TLR4)刺激免疫细胞、诱导血小板聚集并促进血小板聚集的主要蛋白质,可能导致血小板减少症。番木瓜叶提取物似乎对治疗登革热相关血小板减少症具有治疗益处。本研究旨在了解番木瓜叶提取物治疗血小板减少症的潜在机制。我们已经鉴定出番木瓜叶提取物中存在 124 种植物化合物。进行了药代动力学、分子对接、结合自由能计算和分子动力学模拟,以研究药物样性质、结合亲和力以及植物化合物与 NS1 蛋白的相互作用以及 NS1 与 TLR4 的相互作用。发现三种植物化合物与 NS1 蛋白活性位点的关键氨基酸残基 ASN130 结合。因此,我们得出结论,芦丁、杨梅素 3-鼠李糖苷或山奈酚 3-(2''-鼠李糖苷)可能通过干扰 NS1 与 TLR4 的相互作用,作为改善登革热感染患者血小板减少症的有前途的分子。这些分子可以作为治疗登革热相关血小板减少症的药物,在通过额外的体外试验验证其有效性和评估药物效力后使用。

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