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儿童中枢神经系统肿瘤患者中癌症易感性基因的种系变异。

Germline Variants in Cancer Predisposition Genes in Pediatric Patients with Central Nervous System Tumors.

机构信息

Pediatric Oncology Department, National Cancer Research Center, 11000 Belgrade, Serbia.

Laboratory for Molecular Biomedicine, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, 11042 Belgrade, Serbia.

出版信息

Int J Mol Sci. 2023 Dec 12;24(24):17387. doi: 10.3390/ijms242417387.

Abstract

Central nervous system (CNS) tumors comprise around 20% of childhood malignancies. Germline variants in cancer predisposition genes (CPGs) are found in approximately 10% of pediatric patients with CNS tumors. This study aimed to characterize variants in CPGs in pediatric patients with CNS tumors and correlate these findings with clinically relevant data. Genomic DNA was isolated from the peripheral blood of 51 pediatric patients and further analyzed by the next-generation sequencing approach. Bioinformatic analysis was done using an "in-house" gene list panel, which included 144 genes related to pediatric brain tumors, and the gene list panel Neoplasm (HP:0002664). Our study found that 27% of pediatric patients with CNS tumors have a germline variant in some of the known CPGs, like , , , , , , , and . This study represents the first comprehensive evaluation of germline variants in pediatric patients with CNS tumors in the Western Balkans region. Our results indicate the necessity of genomic research to reveal the genetic basis of pediatric CNS tumors, as well as to define targets for the application and development of innovative therapeutics that form the basis of the upcoming era of personalized medicine.

摘要

中枢神经系统(CNS)肿瘤约占儿童恶性肿瘤的 20%。癌症易感基因(CPG)种系变异约占 CNS 肿瘤儿科患者的 10%。本研究旨在分析 CNS 肿瘤儿科患者 CPG 中的变异,并将这些发现与临床相关数据相关联。从 51 名儿科患者的外周血中分离基因组 DNA,并通过下一代测序方法进一步分析。使用包含与小儿脑瘤相关的 144 个基因的“内部”基因列表面板和肿瘤(HP:0002664)基因列表面板进行生物信息学分析。我们的研究发现,27%的 CNS 肿瘤儿科患者在一些已知的 CPG 中存在种系变异,如 BRCA1、BRCA2、ATM、PALB2、CHEK2、NF1、PTEN 和 TP53。本研究代表了对西巴尔干地区 CNS 肿瘤儿科患者种系变异的首次全面评估。我们的结果表明,有必要进行基因组研究,以揭示小儿 CNS 肿瘤的遗传基础,并确定应用和开发创新治疗方法的目标,这些方法构成了即将到来的个体化医疗时代的基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c21a/10744041/d51978ec01ec/ijms-24-17387-g001.jpg

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