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《亚的斯亚贝巴狮子:一个珍稀而珍贵种群的全基因组测序》。

The Addis Ababa Lions: Whole-Genome Sequencing of a Rare and Precious Population.

机构信息

Pharmaceutical Sciences, University of British Columbia, Vancouver, BC, Canada.

Department of Biochemistry and Molecular Biology, Faculty of Medicine, University of British Columbia, Vancouver, BC, Canada.

出版信息

Genome Biol Evol. 2024 Feb 1;16(2). doi: 10.1093/gbe/evae021.

Abstract

Lions are widely known as charismatic predators that once roamed across the globe, but their populations have been greatly affected by environmental factors and human activities over the last 150 yr. Of particular interest is the Addis Ababa lion population, which has been maintained in captivity at around 20 individuals for over 75 yr, while many wild African lion populations have become extinct. In order to understand the molecular features of this unique population, we conducted a whole-genome sequencing study on 15 Addis Ababa lions and detected 4.5 million distinct genomic variants compared with the reference African lion genome. Using functional annotation, we identified several genes with mutations that potentially impact various traits such as mane color, body size, reproduction, gastrointestinal functions, cardiovascular processes, and sensory perception. These findings offer valuable insights into the genetics of this threatened lion population.

摘要

狮子是广为人知的魅力四射的捕食者,曾遍布全球,但在过去的 150 年中,它们的数量受到环境因素和人类活动的极大影响。特别值得关注的是亚的斯亚贝巴狮子种群,它们在圈养状态下已经维持了大约 20 只个体超过 75 年,而许多野生非洲狮种群已经灭绝。为了了解这个独特种群的分子特征,我们对 15 只亚的斯亚贝巴狮子进行了全基因组测序研究,与非洲狮参考基因组相比,共检测到 450 万个独特的基因组变异。通过功能注释,我们鉴定了几个可能影响各种特征的突变基因,如鬃毛颜色、体型、繁殖、胃肠道功能、心血管过程和感官感知。这些发现为这一濒危狮子种群的遗传学提供了有价值的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/21b6/10871700/611e90ba72f2/evae021f1.jpg

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