Department of Molecular Biophysics and Biochemistry, Yale School of Medicine, New Haven, CT, USA.
Nencki Institute of Experimental Biology, Polish Academy of Sciences, Warsaw, Poland.
RNA Biol. 2024 Jan;21(1):1-17. doi: 10.1080/15476286.2024.2346688. Epub 2024 May 27.
Post-transcriptional regulation by RNA binding proteins can determine gene expression levels and drive changes in cancer cell proteomes. Identifying mechanisms of protein-RNA binding, including preferred sequence motifs bound , provides insights into protein-RNA networks and how they impact mRNA structure, function, and stability. In this review, we will focus on proteins that bind to AU-rich elements (AREs) in nascent or mature mRNA where they play roles in response to stresses encountered by cancer cells. ARE-binding proteins (ARE-BPs) specifically impact alternative splicing, stability, decay and translation, and formation of RNA-rich biomolecular condensates like cytoplasmic stress granules (SGs). For example, recent findings highlight the role of ARE-BPs - like TIAR and HUR - in chemotherapy resistance and in translational regulation of mRNAs encoding pro-inflammatory cytokines. We will discuss emerging evidence that different modes of ARE-BP activity impact leukaemia and lymphoma development, progression, adaptation to microenvironment and chemotherapy resistance.
RNA 结合蛋白的转录后调控可以决定基因表达水平,并促使癌细胞蛋白质组发生变化。确定蛋白质-RNA 结合的机制,包括结合的偏好序列基序,为蛋白质-RNA 网络及其如何影响 mRNA 结构、功能和稳定性提供了深入了解。在这篇综述中,我们将重点介绍那些结合新生或成熟 mRNA 中富含 AU 元件(AREs)的蛋白质,这些蛋白质在应对癌细胞遇到的应激时发挥作用。富含 AU 的元素结合蛋白(ARE-BPs)专门影响可变剪接、稳定性、降解和翻译,以及形成富含 RNA 的生物分子凝聚物,如细胞质应激颗粒(SGs)。例如,最近的研究结果强调了 ARE-BPs(如 TIAR 和 HUR)在化疗耐药性和编码促炎细胞因子的 mRNA 翻译调控中的作用。我们将讨论新出现的证据,即不同的 ARE-BP 活性模式会影响白血病和淋巴瘤的发展、进展、对微环境的适应和化疗耐药性。