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挑战比嗪酰胺骨架超越一线抗结核药物:胸苷一磷酸激酶(TMPK)抑制活性和分子模拟研究。

Challenging the Biginelli scaffold to surpass the first line antitubercular drugs: thymidine monophosphate kinase (TMPK) inhibition activity and molecular modelling studies.

机构信息

Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Alexandria University, Alexandria, Egypt.

Medicinal Chemistry Research Laboratory, Pharmacy Group, Birla Institute of Technology and Science, Pilani, India.

出版信息

J Enzyme Inhib Med Chem. 2024 Dec;39(1):2386668. doi: 10.1080/14756366.2024.2386668. Epub 2024 Sep 11.

Abstract

New Biginelli adducts were rationalised, the introduction of selected anti-tubercular (TB) pharmacophores into the dihydropyrimidine (DHPM) ring of deoxythymidine monophosphate (dTMP), the natural substrate of thymidine monophosphate kinase (TMPK). Repurposing was one of the design rationale strategies for some selected mimics of the designed compounds. The anti-TB activity was screened against the M HRv strain where was superior to ethambutol (EMB), and was 9-fold more potent than pyrazinamide (PZA). Additionally, compounds , and elicited higher anti-TB activity than PZA, showing better safety profiles than EMB against RAW 264.7 cells' growth. TMPK inhibition assay released compounds and as the most potent inhibitors. Docking studies presumed the binding modes and molecular dynamics (MD) simulation revealed the dynamic stability of TMPK complex over 100 ns prediction of the chemo-informatics properties of the most active compounds was conducted.

摘要

新的 Biginelli 加合物被合理化,将选定的抗结核(TB)药效团引入脱氧胸苷单磷酸(dTMP)的二氢嘧啶(DHPM)环中,dTMP 是胸苷单磷酸激酶(TMPK)的天然底物。一些设计化合物的类似物的重新定位是设计原理策略之一。抗 TB 活性针对 M HRv 菌株进行了筛选,其中 优于乙胺丁醇(EMB),比吡嗪酰胺(PZA)强 9 倍。此外,化合物 、 和 比 PZA 具有更高的抗 TB 活性,与 EMB 相比,对 RAW 264.7 细胞的生长具有更好的安全性。TMPK 抑制测定释放出 和 作为最有效的抑制剂。对接研究推测了结合模式和分子动力学(MD)模拟揭示了 TMPK 复合物在 100ns 预测中的动态稳定性,对最活跃化合物的 chemo-informatics 性质进行了研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b53/11391879/0bb4ac364022/IENZ_A_2386668_UF0001_C.jpg

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