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天然聚糖的氧化释放:快速 N-聚糖糖组学分析机制的揭示。

Oxidative Release of Natural Glycans: Unraveling the Mechanism for Rapid N-Glycan Glycomics Analysis.

机构信息

Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia 30322, United States.

Emory Glycomics and Molecular Interactions Core, Emory University School of Medicine, Atlanta, Georgia 30322, United States.

出版信息

Anal Chem. 2024 Oct 22;96(42):16750-16757. doi: 10.1021/acs.analchem.4c03246. Epub 2024 Oct 10.

Abstract

N-glycosylation is a critical post-translational modification involved in various biosynthetic pathways and disease mechanisms. In this study, we present an optimized oxidative release of natural glycans (ORNG) method using household bleach that enables the rapid and efficient release of N-glycans from biological samples. We thoroughly investigated the ORNG mechanism, identifying key intermediates and side products and providing valuable insights into the oxidative release process. The method is highly efficient, releasing a wide range of N-glycans, including high-mannose, hybrid, and complex structures, with minimal sample processing. Our ORNG-based specific N-glycan profiling approach has demonstrated high sensitivity and efficiency, particularly in releasing N-glycans resistant to enzymatic digestion, such as core α3-fucosylated N-glycans from soy protein. Validation through mass spectrometry confirmed the method's ability to accurately profile N-glycans from complex biological samples, including human serum, with results comparable to traditional PNGase F digestion. The ORNG-based method's scalability, versatility, and use of low-cost reagents make it especially suited for large-scale glycomics studies. Furthermore, the mass spectrometry data revealed that the ORNG-based method achieves high sensitivity and specificity, positioning it as a robust alternative for comprehensive glycan profiling and functional studies. Our findings highlight ORNG's potential to advance N-glycomics, offering promising improvements in speed, efficiency, and breadth of glycan analysis.

摘要

N-糖基化是一种关键的翻译后修饰,涉及多种生物合成途径和疾病机制。在这项研究中,我们提出了一种使用家用漂白剂优化的氧化释放天然聚糖(ORNG)方法,能够快速有效地从生物样品中释放 N-聚糖。我们深入研究了 ORNG 机制,确定了关键的中间体和副产物,并为氧化释放过程提供了有价值的见解。该方法效率极高,能够释放广泛的 N-聚糖,包括高甘露糖、杂合和复杂结构,且样品处理量最小。我们基于 ORNG 的特定 N-聚糖分析方法具有高灵敏度和高效率,特别是在释放对酶消化有抗性的 N-聚糖方面,如来自大豆蛋白的核心α3-岩藻糖基化 N-聚糖。通过质谱验证证实了该方法能够准确地从复杂的生物样品中分析 N-聚糖,包括人血清,其结果与传统 PNGase F 消化相当。ORNG 方法的可扩展性、多功能性和使用低成本试剂使其特别适合大规模糖组学研究。此外,质谱数据显示,ORNG 方法具有高灵敏度和特异性,是全面聚糖分析和功能研究的一种强大替代方法。我们的研究结果强调了 ORNG 在推进 N-糖组学方面的潜力,在速度、效率和聚糖分析的广度方面提供了有希望的改进。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8ac2/11503514/0e9c6459ae69/ac4c03246_0001.jpg

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