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基于微卫星长度多态性、抗真菌药敏谱及俄罗斯临床分离株酶活性的种群结构

Population Structure Based on Microsatellite Length Polymorphism, Antifungal Susceptibility Profile, and Enzymatic Activity of Clinical Isolates in Russia.

作者信息

Oganesyan Ellina, Klimenteva Victoria, Vybornova Irina, Venchakova Valentina, Parshikova Ekaterina, Kovyrshin Sergey, Orlova Olga, Kruglov Alexander, Gordeeva Svetlana, Vasilyeva Natalya, Taraskina Anastasiya

机构信息

Kashkin Research Institute of Medical Mycology, North-Western State Medical University Named after I.I. Mechnikov, 191015 Saint Petersburg, Russia.

Department of Medical Microbiology, North-Western State Medical University Named after I.I. Mechnikov, 191015 Saint Petersburg, Russia.

出版信息

J Fungi (Basel). 2025 Jan 4;11(1):35. doi: 10.3390/jof11010035.

Abstract

is an emerging multidrug-resistant fungal pathogen causing nosocomial transmission and invasive infections with high mortality. This study aimed to investigate the genetic relationships, enzymatic activities, and drug-resistance profiles of isolates to evaluate the population and epidemiological diversity of candidiasis in Russia. A total of 112 clinical isolates of were analyzed from May 2017 to March 2023 in 18 hospitals across Saint Petersburg, the Leningrad Region, and Moscow. Species identification was confirmed by ITS sequencing, and genotyping was performed using 12 short tandem repeat (STR) markers. Antifungal susceptibility was tested using Sensititre™ YeastOne™ plates, and hydrolytic enzyme production was measured by the plate method. ITS sequencing confirmed that all isolates belonged to a single ITS cluster (clades I and III). Fifteen distinct STR genotypes were identified, with genotype I being dominant ( = 53). The most variable of the analyzed markers turned out to be M3-Ia, which was represented in the Russian population by eight different variants. Fluconazole resistance was found in 111 isolates, 17% were resistant to amphotericin B, and 3.6% to 5-flucytosine. Phospholipase activity was strong in most strains, especially in urine isolates ( = 0.014). Conclusion: The predominance of STR genotype I and its variability at the M3-Ia locus suggest its association with nosocomial outbreaks and transmissibility in Russia.

摘要

是一种新兴的多重耐药真菌病原体,可导致医院内传播和侵袭性感染,死亡率很高。本研究旨在调查分离株的遗传关系、酶活性和耐药谱,以评估俄罗斯念珠菌病的种群和流行病学多样性。2017年5月至2023年3月期间,从圣彼得堡、列宁格勒州和莫斯科的18家医院共分析了112株临床分离株。通过ITS测序确认菌种鉴定,并使用12个短串联重复序列(STR)标记进行基因分型。使用Sensititre™ YeastOne™平板测试抗真菌药敏性,并通过平板法测量水解酶的产生。ITS测序证实所有分离株属于单个ITS簇(进化枝I和III)。鉴定出15种不同的STR基因型,其中基因型I占主导地位(=53)。分析的标记中变化最大的是M3-Ia,在俄罗斯种群中有8种不同的变体。111株分离株发现对氟康唑耐药,17%对两性霉素B耐药,3.6%对5-氟胞嘧啶耐药。大多数菌株的磷脂酶活性很强,尤其是尿液分离株(=0.014)。结论:STR基因型I的优势及其在M3-Ia位点的变异性表明其与俄罗斯医院内暴发和传播有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6f1/11766443/65bc929d344e/jof-11-00035-g001.jpg

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