Effiong Magdalene Eno, Bella-Omunagbe Mercy, Afolabi Israel Sunmola, Chinedu Shalom Nwodo
Department of Biochemistry, College of Science and Technology, Covenant University, Ota, Nigeria.
Covenant Applied Informatics and Communication Africa Centre of Excellence (CApIC-ACE), Covenant University, Ota, Nigeria.
Bioinform Biol Insights. 2025 Feb 3;19:11779322251316864. doi: 10.1177/11779322251316864. eCollection 2025.
Breast cancer (BC) is a heterogeneous disease involving a network of numerous extracellular signal transduction pathways. The phosphoinositide 3-kinase (PI3K)/serine/threonine kinase (Akt)/mechanistic target of rapamycin (mTOR) pathway is crucial for understanding the BC development. Phosphoinositide 3-kinase, phosphatase and tensin homolog (PTEN), mTOR, Akt, 3-phosphoinositide-dependent kinase 1 (PDK1), FoxO1, glycogen synthase kinase 3 (GSK-3), mouse double minute 2 (MDM2), H-Ras, and proapoptotic B-cell lymphoma 2 (BCL-2) family protein (BAD) proteins are key drivers of this pathway and potential therapeutic targets. is an edible mushroom that is rich in flavonoids and phenols that can serve as potential inhibitors of proteins in the PI3K/Akt/mTOR pathway.
This study evaluated the anticancer properties of through a structure-based virtual screening of 22 biologically active compounds present in the mushroom.
Model optimization was carried out on PI3K, PTEN, mTOR, Akt, PDK1, FoxO1, GSK-3, MDM2, H-Ras, and BAD proteins in the PI3K/Akt/mTOR pathway and molecular docking of compounds/control inhibitors in the binding pocket were simulated AutoDock Vina in PyRx. The drug likeness, pharmacokinetic, and pharmacodynamic features of prospective docking leads were all anticipated.
Several potent inhibitors of the selected key driver proteins in PI3K/Akt/mTOR pathway were identified from . Ellagic acid with binding affinities of -8.0, -8.0, -8.1, -8.2, -6.2, and -7.1 kcal/mol on PI3K, Akt, PDK1, GSK-3, MDM2, and BAD, respectively, had better binding affinity compared with their reference drugs. Likewise, apigenin (-7.8 kcal/mol), chrysin (-7.8 kcal/mol), quercetin (-6.4 kcal/mol), and chlorogenic acid (-6.2 kcal/mol) had better binding affinities to PTEN, mTOR, FoxO1, and H-Ras proteins, respectively.
Ellagic acid, apigenin, luteolin, quercetin, chlorogenic acid, chrysin, and naringenin phytochemicals are seen as the better lead molecules due to their ability to strongly bind to the proteins under study in this pathway. Analogs of these compounds can also be designed as potential drugs.
乳腺癌(BC)是一种异质性疾病,涉及众多细胞外信号转导途径网络。磷酸肌醇3激酶(PI3K)/丝氨酸/苏氨酸激酶(Akt)/雷帕霉素作用靶点(mTOR)途径对于理解乳腺癌的发展至关重要。磷酸肌醇3激酶、磷酸酶和张力蛋白同源物(PTEN)、mTOR、Akt、3-磷酸肌醇依赖性激酶1(PDK1)、叉头框蛋白O1(FoxO1)、糖原合酶激酶3(GSK-3)、小鼠双微体2(MDM2)、H-Ras以及促凋亡B细胞淋巴瘤2(BCL-2)家族蛋白(BAD)是该途径的关键驱动因子和潜在治疗靶点。[某种蘑菇名称]是一种富含黄酮类化合物和酚类的可食用蘑菇,这些成分可作为PI3K/Akt/mTOR途径中蛋白质的潜在抑制剂。
本研究通过对该蘑菇中存在的22种生物活性化合物进行基于结构的虚拟筛选,评估了[某种蘑菇名称]的抗癌特性。
对PI3K/Akt/mTOR途径中的PI3K、PTEN、mTOR、Akt、PDK1、FoxO1、GSK-3、MDM2、H-Ras和BAD蛋白进行模型优化,并在PyRx中使用AutoDock Vina模拟化合物/对照抑制剂在结合口袋中的分子对接。预测了潜在对接先导物的药物相似性、药代动力学和药效学特征。
从[某种蘑菇名称]中鉴定出了几种PI3K/Akt/mTOR途径中选定关键驱动蛋白的有效抑制剂。鞣花酸对PI3K、Akt、PDK1、GSK-3、MDM2和BAD的结合亲和力分别为-8.0、-8.0、-8.1、-8.2、-6.2和-7.1千卡/摩尔,与它们的参考药物相比具有更好的结合亲和力。同样,芹菜素(-7.8千卡/摩尔)、白杨素(-7.8千卡/摩尔)、槲皮素(-6.4千卡/摩尔)和绿原酸(-6.2千卡/摩尔)分别对PTEN、mTOR、FoxO1和H-Ras蛋白具有更好的结合亲和力。
鞣花酸、芹菜素、木犀草素、槲皮素、绿原酸、白杨素和柚皮素等植物化学物质因其能够与该途径中所研究的蛋白质紧密结合而被视为更好的先导分子。这些化合物的类似物也可设计为潜在药物。