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解读口腔癌:来自微小RNA表达谱及其调控靶点的见解

Decoding oral cancer: insights from miRNA expression profiles and their regulatory targets.

作者信息

Wang Xin, Zhang Shuang, Wang Shuyi, Cao Tao, Fan Hong

机构信息

Department of Endodontics, The First Affiliated Hospital of Harbin Medical University, Harbin, China.

Department of Endodontics, School of Stomatology, Harbin Medical University, Harbin, China.

出版信息

Front Mol Biosci. 2025 Jan 28;11:1521839. doi: 10.3389/fmolb.2024.1521839. eCollection 2024.

Abstract

Oral cancer (OC) is a prevalent malignancy with high mortality rates, largely attributed to late diagnosis and limited therapeutic advancements. MicroRNAs (miRNAs), as critical regulators of gene expression, have emerged as key players in modulating plethora of cellular mechanisms. This study analyzed miRNA and gene expression profiles in OC using publicly available datasets from the Gene Expression Omnibus (GEO) to explore their roles in tumorigenesis. A total of 23 differentially expressed miRNAs (DEmiRs) and 1,233 differentially expressed genes (DEGs) were identified. Functional annotation and pathway enrichment analyses highlighted significant involvement of DEmiRs and their target genes in cell cycle-related processes, including enrichment in the nucleus, transcription factor activity, regulation of nucleosides, nucleotide and nucleic acids, cell growth and/or maintenance, mitotic cell cycle, mitotic M-M/G1 phases an DNA replication. Furthermore, different signaling cascades such as IGF signaling, PDGF signaling and LKB1 signaling and PLK1 signaling pathways were also found associated with DEmiR-related regulation of OC progression. Protein-protein interaction (PPI) network analysis identified key molecular hubs associated with DEmiR and DEGs in OC. Notably, most of these hub genes such as NEK2, NDC80, NUF2, PLK1, SMAD2, TP53, TPX2, TTK, UBE2C, WDHD1, WTAP, YWHAZ are directly or indirectly associated with cell cycle progression, underscoring the role of DEmiRs in driving tumor proliferation and survival in OC via dysregulating cell cycle. This study offers insights into the molecular mechanisms underlying OC and highlights miRNAs as potential biomarkers and therapeutic targets to disrupt the cancerous cell cycle and improve treatment outcomes.

摘要

口腔癌(OC)是一种普遍存在的恶性肿瘤,死亡率很高,这在很大程度上归因于诊断延迟和治疗进展有限。微小RNA(miRNA)作为基因表达的关键调节因子,已成为调节众多细胞机制的关键因素。本研究使用来自基因表达综合数据库(GEO)的公开数据集分析了OC中的miRNA和基因表达谱,以探索它们在肿瘤发生中的作用。共鉴定出23个差异表达的miRNA(DEmiR)和1233个差异表达的基因(DEG)。功能注释和通路富集分析突出了DEmiR及其靶基因在细胞周期相关过程中的显著参与,包括在细胞核中的富集、转录因子活性、核苷、核苷酸和核酸的调节、细胞生长和/或维持、有丝分裂细胞周期、有丝分裂M-M/G1期以及DNA复制。此外,还发现不同的信号级联反应,如IGF信号通路、PDGF信号通路、LKB1信号通路和PLK1信号通路也与OC进展的DEmiR相关调节有关。蛋白质-蛋白质相互作用(PPI)网络分析确定了与OC中的DEmiR和DEG相关的关键分子枢纽。值得注意的是,这些枢纽基因中的大多数,如NEK2、NDC80、NUF2、PLK1、SMAD2、TP53、TPX2、TTK、UBE2C、WDHD1、WTAP、YWHAZ,直接或间接与细胞周期进程相关,强调了DEmiR通过失调细胞周期在驱动OC肿瘤增殖和存活中的作用。本研究为OC潜在的分子机制提供了见解,并突出了miRNA作为潜在的生物标志物和治疗靶点,以破坏癌细胞周期并改善治疗效果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa07/11810738/2886fd5f89c4/fmolb-11-1521839-g001.jpg

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