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从土壤到地表水:探索环境健康中克雷伯菌的克隆谱系及抗生素耐药历程

From soil to surface water: exploring Klebsiella 's clonal lineages and antibiotic resistance odyssey in environmental health.

作者信息

Araújo Sara, Silva Vanessa, Quintelas Micaela, Martins Ângela, Igrejas Gilberto, Poeta Patricia

机构信息

Microbiology and Antibiotic Resistance Team (MicroART), Department of Veterinary Sciences, University of Trás-Os-Montes and Alto Douro (UTAD), Vila Real, Portugal.

Department of Genetics and Biotechnology, University of Trás-Os-Montes and Alto Douro, Vila Real, Portugal.

出版信息

BMC Microbiol. 2025 Feb 27;25(1):97. doi: 10.1186/s12866-025-03798-8.

Abstract

In the last decade, the presence of resistant bacteria and resistance genes in the environment has been a cause for increasing concern. However, understanding of its contribution to the spread of bacteria remains limited, as the scarcity of studies on how and under what circumstances the environment facilitates the development of resistance poses challenges in mitigating the emergence and spread of mobile resistance factors. Antimicrobial resistance in the environment is considered one of the biggest challenges and threats currently emerging. Thus, monitoring the presence of antibiotic-resistant species, in this particular case, Klebsiella spp., in the environment can be an added value for understanding the epidemiology of infections caused by Klebsiella spp.. Investigating soils and waters as potential reservoirs and transmission vehicles for these bacteria is imperative. Therefore, in this review, we aimed to describe the main genetic lineages present in environmental samples, as well as to describe the multidrug resistance strains associated with each environmental source. The studies analyzed in this review reported a high diversity of species and strains of Klebsiella spp. in the environment. K. pneumoniae was the most prevalent species, both in soil and water samples, and, as expected, often presented a multi-resistant profile. The presence of K. pneumoniae ST11, ST15, and ST147 suggests human and animal origin. Concerning surface waters, there was a great diversity of species and STs of Klebsiella spp. These studies are crucial for assessing the environmental contribution to the spread of pathogenic bacteria.

摘要

在过去十年中,环境中耐药细菌和耐药基因的存在引发了越来越多的关注。然而,由于关于环境如何以及在何种情况下促进耐药性发展的研究稀缺,这给减轻移动耐药因子的出现和传播带来了挑战,因此对其在细菌传播中所起作用的了解仍然有限。环境中的抗菌药物耐药性被认为是当前正在出现的最大挑战和威胁之一。因此,监测环境中抗生素耐药菌的存在,在这种特定情况下即克雷伯菌属,对于了解由克雷伯菌属引起的感染的流行病学可能具有额外价值。将土壤和水作为这些细菌的潜在储存库和传播媒介进行调查势在必行。因此,在本综述中,我们旨在描述环境样本中存在的主要遗传谱系,以及描述与每个环境来源相关的多重耐药菌株。本综述中分析的研究报告了环境中克雷伯菌属的物种和菌株具有高度多样性。肺炎克雷伯菌是土壤和水样中最普遍的物种,并且正如预期的那样,常常呈现多重耐药特征。肺炎克雷伯菌ST11、ST15和ST147的存在表明其来源于人类和动物。关于地表水,克雷伯菌属的物种和序列型具有很大的多样性。这些研究对于评估环境对病原菌传播的影响至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/605d/11866855/8fa88d0dc74a/12866_2025_3798_Fig1_HTML.jpg

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