Suppr超能文献

妊娠特异性糖蛋白作为女性肺腺癌患者潜在的药物靶点。

Pregnancy-specific glycoproteins as potential drug targets for female lung adenocarcinoma patients.

作者信息

Oh Jung Hun, Rizzuto Gabrielle, Elkin Rena, Weistuch Corey, Norton Larry, Dveksler Gabriela, Deasy Joseph O

机构信息

Department of Medical Physics, Memorial Sloan Kettering Cancer Center, 321 E 61st Street, New York, NY 10065, United States.

Human Oncology and Pathogenesis Program, Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, 1275 York Ave, New York, NY 10065, United States.

出版信息

Brief Funct Genomics. 2025 Jan 15;24. doi: 10.1093/bfgp/elaf004.

Abstract

Recently, the mRNA presence of pregnancy-specific glycoproteins (PSGs) in cancer biopsies has been shown to be associated with poor survival. Given the pregnancy-related function of PSGs, we hypothesized that PSGs might act in a sex-dependent behavior in cancer patients. A differential sex effect of PSG genes with respect to tumor immune landscape and cancer outcomes was investigated using statistical, bioinformatic, and machine learning analyses in The Cancer Genome Atlas (TCGA) data. The resulting findings were then validated in the Clinical Proteomic Tumor Analysis Consortium (CPTAC) data. In a pan-cancer TCGA data analysis, the strongest PSG-related sex difference for the prognostic association was found in lung adenocarcinoma (LUAD). Kaplan-Meier analysis revealed that expression of PSG genes is strongly associated with overall survival rate in the female group on the TCGA, but not in the male group. This sex-specific association was validated in an independent dataset from the CPTAC study. A combination of PSG3, PSG7, and PSG8 expression was most significantly linked to poor prognosis in females (P = 8.67E-06 in TCGA and P = .0382 in CPTAC). Pathway analysis revealed enrichment of the 'KRAS Signaling Down' pathway in the high-risk female group. A predictive model showed good predictive performance for the female group (validated C-index = 0.78 in CPTAC), but poor predictive performance for the male group. These findings suggest that PSGs may have a sex-specific negative impact on survival in female LUAD patients, and the mechanism may be related to KRAS signaling pathway modulation.

摘要

最近,癌症活检中妊娠特异性糖蛋白(PSG)的mRNA表达已被证明与患者的不良预后相关。鉴于PSG与妊娠相关的功能,我们推测PSG在癌症患者中可能存在性别依赖性作用。我们使用统计、生物信息学和机器学习分析方法,在癌症基因组图谱(TCGA)数据中研究了PSG基因在肿瘤免疫格局和癌症预后方面的性别差异效应。随后,在临床蛋白质组肿瘤分析联盟(CPTAC)的数据中对所得结果进行了验证。在一项泛癌TCGA数据分析中,发现肺腺癌(LUAD)中PSG相关的预后关联存在最显著的性别差异。Kaplan-Meier分析显示,在TCGA数据中,PSG基因的表达与女性组的总生存率密切相关,但与男性组无关。这种性别特异性关联在CPTAC研究的独立数据集中得到了验证。PSG3、PSG7和PSG8的联合表达与女性的不良预后最显著相关(在TCGA中P = 8.67E-06,在CPTAC中P = 0.0382)。通路分析显示,高危女性组中“KRAS信号传导下调”通路富集。一个预测模型对女性组显示出良好的预测性能(在CPTAC中验证的C指数 = 0.78),但对男性组的预测性能较差。这些发现表明,PSG可能对女性LUAD患者的生存有性别特异性的负面影响,其机制可能与KRAS信号通路的调节有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13f9/12010166/e326f30eed87/elaf004f1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验