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新种桐花树伴生菌,一种从桐花树根部分离出的新型内生细菌。

Consotaella aegiceratis sp. nov., a Novel Endophytic Bacterium Isolated from Root of Aegiceras corniculatum.

作者信息

Luo Yifen, Zan Chengshao, Chen Mingsheng, Liu Fang, Chen Xiaohui, Zheng Zhouqing, Ma Xiao, Tuo Li

机构信息

School of Basic Medical Sciences, Zunyi Medical University, Zunyi, 563006, People's Republic of China.

Clinical Laboratory, Tongren City People's Hospital, Tongren, 554300, People's Republic of China.

出版信息

Curr Microbiol. 2025 May 27;82(7):309. doi: 10.1007/s00284-025-04294-y.

Abstract

A Gram-stain-negative, aerobic, short rod-shaped and motile bacterium, designated strain CSK11QG-6 was isolated from root of Aegiceras corniculatum taken from Shankou Mangrove Ecological National Nature Reserve in Guangxi Zhuang Autonomous Region, China. Global alignment based on 16S rRNA gene sequences indicated that strain CSK11QG-6 shared the highest identity of 96.5% with Consotaella salsifontis USBA 369. Phylogenetic analyses based on 16S rRNA gene sequences and genome sequences indicated that strain CSK11QG-6 clustered together with Consotaella salsifontis USBA 369. Strain CSK11QG-6 had a genome size of 5.42 Mbp, with a N50 of 97.8 kb and coverage of 138 × . The DNA G + C content was 64.8%. The orthologous average nucleotide identity and digital DNA-DNA hybridization values of strain CSK11QG-6 with related species fell below the proposed species delineation threshold of 95-96% and 70%, respectively, indicating that strain CSK11QG-6 represented a novel species. Strain CSK11QG-6 contained Cω7c and C as the predominant fatty acids, and uniquinone-10 as the respiratory quinone. The major polar lipids were phosphatidylglycerol, phosphatidylcholine, diphosphatidylglycerol, phosphatidylethanolamine, an unidentified aminolipids and two unidentified phospholipids. Strain CSK11QG-6 exhibited chemical characteristics of fatty acids, lipids and quinones typical for the genus Consotaella, but could be clearly differentiated from Consotaella by many of phenotypic characteristics. Based on phylogenomic and phylogenetic analyses coupled with phenotypic and chemotaxonomic characterizations, strain CSK11QG-6 represents a novel species of the genus Consotaella, for which the name Consotaella aegiceratis sp. nov. is proposed. The type strain is CSK11QG-6 (= MCCC 1K07176 = JCM 35044).

摘要

从中国广西壮族自治区山口红树林生态国家级自然保护区的桐花树根部分离出一株革兰氏染色阴性、需氧、短杆状且具运动性的细菌,命名为CSK11QG-6菌株。基于16S rRNA基因序列的全局比对表明,CSK11QG-6菌株与盐生康氏菌USBA 369的相似度最高,为96.5%。基于16S rRNA基因序列和基因组序列的系统发育分析表明,CSK11QG-6菌株与盐生康氏菌USBA 369聚为一类。CSK11QG-6菌株的基因组大小为5.42 Mbp,N50为97.8 kb,覆盖度为138×。DNA G+C含量为64.8%。CSK11QG-6菌株与相关物种的直系同源平均核苷酸一致性和数字DNA-DNA杂交值分别低于95%-96%和70%的拟议物种界定阈值,表明CSK11QG-6菌株代表一个新物种。CSK11QG-6菌株以Cω7c和C作为主要脂肪酸,以泛醌-10作为呼吸醌。主要极性脂为磷脂酰甘油、磷脂酰胆碱、二磷脂酰甘油、磷脂酰乙醇胺、一种未鉴定的氨基脂和两种未鉴定的磷脂。CSK11QG-6菌株表现出康氏菌属典型的脂肪酸、脂质和醌类化学特征,但在许多表型特征上可与康氏菌属明显区分。基于系统基因组学和系统发育分析,结合表型和化学分类学特征,CSK11QG-6菌株代表康氏菌属的一个新物种,为此提出新名称盐生康氏菌(Consotaella aegiceratis sp. nov.)。模式菌株为CSK11QG-6(=MCCC 1K07176=JCM 35044)。

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