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在家禽食物链中检测到耐头孢曲松的巴拿马ST48:系统地理学分析。

Ceftriaxone-resistant Panama ST48 detected in poultry food chain: A phylogeographical analysis.

作者信息

Fontana Herrison, Fuga Bruna, Martins-Gonçalves Thais, Esposito Fernanda, Cardoso Brenda, Beatriz Laura Rodrigues, Lincopan Nilton

机构信息

Department of Clinical Analysis, School of Pharmaceutical Sciences, Universidade de São Paulo, São Paulo, Brazil.

One Health Brazilian Project (OneBR), São Paulo, Brazil.

出版信息

One Health. 2025 May 12;20:101073. doi: 10.1016/j.onehlt.2025.101073. eCollection 2025 Jun.

Abstract

Panama is a clinically relevant serovar isolated from food sources, particularly poultry and swine, being also reported in human gastrointestinal and extraintestinal disease globally. The emergence of broad-spectrum cephalosporin-resistant has been considered a One Health matter that demands continuous microbiologic and genomic surveillance for a comprehensive understanding and mitigation actions. During a local surveillance study conducted to monitoring WHO priority spp. in the Brazilian poultry food chain, a ceftriaxone-resistant strain (PN2) exhibiting a positive extended-spectrum beta-lactamase (ESBL) phenotype was recovered from a chicken sample, in a slaughterhouse under federal inspection. Clinically relevant genomic data confirmed Panama sequence type (ST) 48 carrying the ESBL gene into the broad-host range IncM1conjugative plasmid, and displaying point mutations in the quinolone determining resistance region (QRDR), related to fluoroquinolone non-susceptibility. Phylogeographical analysis of publicly available global genomes of Panama ST48 revealed a potential concern for One Health issues due to its zoonotic nature, clustering PN2 (52-153 cgSNP differences) along with genomically related Panama strains isolated from human infections, food products, and farm animals, in the United States of America and Brazil. Interestingly, using Bayesian clustering method, the PN2 strain was grouped in the main clade C4, along with a CTX-M-55-producing Panama strain isolated from a human stool sample in Taiwan. In summary, we alert for the potential risk of dissemination of a neglected serovar that has contributed to the global disease burden through the food supply chain.

摘要

巴拿马是一种从食物来源,特别是家禽和猪中分离出的具有临床相关性的血清型,在全球人类胃肠道和肠道外疾病中也有报道。广谱头孢菌素耐药性的出现被认为是一个“同一健康”问题,需要持续进行微生物学和基因组监测,以全面了解并采取缓解措施。在一项为监测巴西家禽食物链中世界卫生组织重点关注的菌种而进行的本地监测研究中,从一家接受联邦检查的屠宰场的一份鸡肉样本中分离出一株对头孢曲松耐药的菌株(PN2),该菌株表现出阳性的超广谱β-内酰胺酶(ESBL)表型。临床相关的基因组数据证实,巴拿马序列型(ST)48携带ESBL基因进入广泛宿主范围的IncM1接合质粒,并在喹诺酮耐药决定区(QRDR)显示点突变,与氟喹诺酮不敏感有关。对公开可得的巴拿马ST48全球基因组进行系统发育地理分析发现,由于其人畜共患病性质,存在“同一健康”问题的潜在隐患,将PN2(52 - 153个核心单核苷酸多态性差异)与从美国和巴西的人类感染、食品和农场动物中分离出的基因组相关的巴拿马菌株聚类在一起。有趣的是,使用贝叶斯聚类方法,PN2菌株与从台湾一名人类粪便样本中分离出的一株产生CTX-M-55的巴拿马菌株一起被归入主要分支C4。总之,我们警惕一种被忽视的血清型通过食品供应链传播从而导致全球疾病负担增加的潜在风险。

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