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在基因上与非洲和欧洲参考人群相似的人群中,肌联蛋白截短变异易导致扩张型心肌病。

Titin-Truncating variants predispose to dilated cardiomyopathy in populations genetically similar to african and european reference populations.

作者信息

DePaolo John, Bornstein Marc R, Judy Renae, Abramowitz Sarah, Verma Shefali S, Levin Michael G, Biobank Penn Medicine, Arany Zoltan, Damrauer Scott M

机构信息

Department of Surgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.

Cardiovascular Institute, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.

出版信息

PLoS Genet. 2025 Jun 13;21(6):e1011727. doi: 10.1371/journal.pgen.1011727. eCollection 2025 Jun.

Abstract

The effect of high percentage spliced in (hiPSI) TTN truncating variants (TTNtvs) on risk of dilated cardiomyopathy (DCM) has historically been studied among population subgroups defined by genetic similarity to European reference populations. This has raised questions about the effect of TTNtvs in diverse populations, especially among individuals genetically similar to African reference populations. To determine the effect of TTNtvs on cardiovascular disease risk, we leveraged whole exome sequencing and electronic health record data from 43,731 Penn Medicine Biobank (PMBB) participants recruited from across the Penn Medicine healthcare system. Fraction of genetic similarity to the 1000 Genomes Project (1000G) African (AFR) reference population was determined using ADMIXTURE analysis. Logistic regression was performed to evaluate the association of hiPSI TTNtvs with prevalent DCM and atrial fibrillation (Afib), and linear regression was used to evaluate the association with reduced left ventricular ejection fraction (LVEF) either using dichotomized genetically similar population subgroup analysis or integrating ADMIXTURE population fraction. When individuals were assigned to population subgroups based on genetic similarity to the 1000G reference populations, hiPSI TTNtvs conferred significant risk of DCM among those genetically similar to the 1000G European (EUR) reference population (OR=6.12, 95% confidence intervals [CI] 4.33 to 8.65, P < 0.001) and individuals genetically similar to the AFR reference population (OR=3.44, 95% CI 1.97 to 5.99, P < 0.001). These results were consistent when considering the effect of change in fraction of similarity to the African reference population by ADMIXTURE as a continuous variable. Similar results were observed for the effect of TTNtvs on Afib and LVEF. Our findings demonstrate that TTNtvs are associated with increased risk of DCM, reduced LVEF, and Afib among a diverse cohort. There is no significant difference in effect of TTNtvs across fractions of similarity to the AFR reference population suggesting genetic background should not be considered when screening individuals for titin-related cardiovascular disease.

摘要

历史上,高百分比剪接入(hiPSI)的肌联蛋白截短变异(TTNtvs)对扩张型心肌病(DCM)风险的影响是在与欧洲参考人群基因相似性定义的人群亚组中进行研究的。这引发了关于TTNtvs在不同人群中的影响的问题,尤其是在与非洲参考人群基因相似的个体中。为了确定TTNtvs对心血管疾病风险的影响,我们利用了来自宾夕法尼亚大学医疗系统招募的43731名宾夕法尼亚大学医学生物样本库(PMBB)参与者的全外显子组测序和电子健康记录数据。使用ADMIXTURE分析确定与千人基因组计划(1000G)非洲(AFR)参考人群的基因相似性分数。进行逻辑回归以评估hiPSI TTNtvs与现患DCM和心房颤动(Afib)的关联,并使用线性回归通过二分法基因相似人群亚组分析或整合ADMIXTURE人群分数来评估与降低的左心室射血分数(LVEF)的关联。当根据与1000G参考人群的基因相似性将个体分配到人群亚组时,hiPSI TTNtvs在与1000G欧洲(EUR)参考人群基因相似的个体(OR = 6.12,95%置信区间[CI] 4.33至8.65,P < 0.001)和与AFR参考人群基因相似的个体(OR = 3.44,95% CI 1.97至5.99,P < 0.001)中赋予了显著的DCM风险。当将ADMIXTURE分析中与非洲参考人群相似性分数的变化作为连续变量考虑时,这些结果是一致的。对于TTNtvs对Afib和LVEF的影响也观察到了类似结果。我们的研究结果表明,在不同队列中,TTNtvs与DCM风险增加、LVEF降低和Afib相关。TTNtvs在与AFR参考人群不同相似性分数中的影响没有显著差异,这表明在筛查与肌联蛋白相关的心血管疾病个体时不应考虑遗传背景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/460f/12237270/8b40d9735e37/pgen.1011727.g001.jpg

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