Shaheer Mohammad, Garg Naveen, Aftab Ana, Jan Iram, Alvi Shakeel, Kumar Akhilesh, Siddiqui Nazia, Javed Saleem, Divya P, Shahid Mudassar
Department of Chemistry, Jamia Millia Islamia, New Delhi, Delhi, 110025, India.
Department of Chemistry and NanoScience, Ewha Womans University, Seoul, 03760, Korea.
BMC Chem. 2025 Jul 3;19(1):197. doi: 10.1186/s13065-025-01562-7.
5-Bromo-2-Hydroxybenzaldehyde or 5-Bromosalicylaldehyde has been thoroughly scrutinized both experimentally and theoretically. To perform its theoretical calculations, we have used the DFT (Density Function Theory) approach and the most suitable basis set 6-311 + + G(d, p) was implied for its optimisation. As a result, the optimised structure and its output file served the basis for other calculations which includes the study of different vibrations in a molecule (O-H, C-H, C-C, C = O) that are responsible for its stabilization. The electron density maps (MEP, ELF) with the specialized colour gradients were plotted and examined to explore the distribution of electrons within the molecule. UV-Visible studies were carried out in different solvents to analyse its absorbance and the effect of solvent on its wavelength. Electron transfers associated with the band gaps of FMO's were inspected for the evaluation of its Ionization Energy, Electron Gain Enthalpy, Electrophilicity index etc. The variation of its thermodynamic properties with the temperature was studied to find out the reaction feasibility and direction of equilibrium. The type and strength of bonding present in it (RDG) was also surveyed. The hybridisation and deviation in the hybridised orbitals and angles (NBO) were examined to analyse the chemical stability of the taken molecule. After that, we delved into exploring the nature of different type of attacking sites (Fukui Function) i.e., neutral, electrophilic and nucleophilic along with hyperconjugation (NBO) present in the molecule. To dig deep into other properties like its skin permeability, bioavailability etc., its derivatives were also examined for Drug Likeness. Molecular docking and molecular dynamics simulations were also executed for the study of interactions between the molecule and different proteins. All the above-mentioned studies have shown comparable results with the experimental calculations, making the molecule suitable for the implication in pharmaceutical drug synthesis.
5-溴-2-羟基苯甲醛或5-溴水杨醛已在实验和理论上进行了深入研究。为了进行其理论计算,我们采用了密度泛函理论(DFT)方法,并使用了最合适的基组6-311++G(d, p)对其进行优化。结果,优化后的结构及其输出文件为其他计算奠定了基础,这些计算包括研究分子中不同振动(O-H、C-H、C-C、C=O)对其稳定性的影响。绘制并检查了具有特定颜色梯度的电子密度图(MEP、ELF),以探索分子内电子的分布。在不同溶剂中进行紫外-可见光谱研究,以分析其吸光度以及溶剂对其波长的影响。检查与前线分子轨道(FMO)带隙相关的电子转移,以评估其电离能、电子亲和能、亲电性指数等。研究其热力学性质随温度的变化,以确定反应的可行性和平衡方向。还考察了其中存在的键合类型和强度(RDG)。检查杂化轨道和角度的杂化及偏差(NBO),以分析所研究分子的化学稳定性。之后,我们深入探索了不同类型进攻位点(福井函数)的性质,即中性、亲电和亲核位点,以及分子中存在的超共轭(NBO)。为了深入研究其皮肤渗透性、生物利用度等其他性质,还对其衍生物进行了药物相似性研究。还进行了分子对接和分子动力学模拟,以研究该分子与不同蛋白质之间的相互作用。上述所有研究结果与实验计算结果具有可比性,这使得该分子适用于药物合成。