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环状RNA_0001412和环状RNA_0001566作为类风湿关节炎诊断的潜在生物标志物

CircRNA_0001412 and CircRNA_0001566 as Potential Biomarkers for the Diagnosis of Rheumatoid Arthritis.

作者信息

Li Xin, Deng Ao, Wang Zehao, Liao Shenling, Luo Kaihong, Hu Jing, Yang Bin

机构信息

Department of Laboratory Medicine, West China Hospital of Sichuan University, No. 37 Guoxue Road Wuhou District, Chengdu, 640041, China.

Department of Laboratory Medicine, West China Tianfu Hospital of Sichuan University, Chengdu, China.

出版信息

Biochem Genet. 2025 Aug 14. doi: 10.1007/s10528-025-11219-8.

Abstract

Rheumatoid arthritis (RA) is a chronic autoimmune disease with high disability rates, necessitating early diagnosis. This study investigated the potential of circRNAs, specifically CircRNA_0001412 and CircRNA_0001566, as diagnostic biomarkers for RA. High-throughput transcriptome sequencing was performed on peripheral blood mononuclear cells (PBMCs) from RA patients and healthy controls to identify differentially expressed circRNAs. Reverse transcription quantitative PCR (RT-qPCR) was used to validate circRNA expression in an independent cohort of 78 RA patients and 82 healthy controls. Receiver operating characteristic (ROC) curve analysis was performed to assess the diagnostic value of the selected circRNAs. Correlation analyses with clinical markers such as CRP, ESR, CCP, RF, WBC, lymphocyte count, and monocyte count were also conducted. Bioinformatics analyses, including GO and KEGG pathway enrichment, were conducted to explore the functional roles of the identified circRNAs and associated miRNAs. A total of 54 circRNAs were identified as differentially expressed in RA, with 21 circRNAs upregulated and 33 downregulated. Among these, CircRNA_0001412 and CircRNA_0001566 were highly expressed in RA PBMCs and demonstrated good sensitivity and specificity as diagnostic biomarkers (AUC = 0.751 (95%CI 0.673, 0.830) and 0.605(95%CI 0.516, 0.694)). Combined analysis of these circRNAs further improved diagnostic performance (AUC = 0.776 (95%CI 0.702, 0.851)). Notably, CircRNA_0001412 showed a significant correlation with CRP, suggesting its potential as a biomarker for RA disease severity. Bioinformatics analysis predicted that CircRNA_0001412 and CircRNA_0001566 could promote T-cell activation via the PI3K-Akt signaling pathway, contributing to RA pathogenesis. CircRNA_0001412 and CircRNA_0001566 are promising diagnostic biomarkers for RA, with CircRNA_0001412 additionally serving as a potential indicator of inflammatory activity. These findings provide a basis for further research into the diagnostic and prognostic utility of circRNAs in RA.

摘要

类风湿关节炎(RA)是一种致残率很高的慢性自身免疫性疾病,需要早期诊断。本研究调查了环状RNA,特别是CircRNA_0001412和CircRNA_0001566作为RA诊断生物标志物的潜力。对RA患者和健康对照的外周血单个核细胞(PBMC)进行高通量转录组测序,以鉴定差异表达的环状RNA。采用逆转录定量PCR(RT-qPCR)在78例RA患者和82例健康对照的独立队列中验证环状RNA的表达。进行受试者工作特征(ROC)曲线分析,以评估所选环状RNA的诊断价值。还进行了与CRP、ESR、CCP、RF、WBC、淋巴细胞计数和单核细胞计数等临床标志物的相关性分析。进行了包括GO和KEGG通路富集在内的生物信息学分析,以探索已鉴定的环状RNA和相关miRNA的功能作用。共鉴定出54种在RA中差异表达的环状RNA,其中21种环状RNA上调,33种下调。其中,CircRNA_0001412和CircRNA_0001566在RA的PBMC中高表达,并作为诊断生物标志物表现出良好的敏感性和特异性(AUC = 0.751(95%CI 0.673,0.830)和0.605(95%CI 0.516,0.694))。这些环状RNA的联合分析进一步提高了诊断性能(AUC = 0.776(95%CI 0.702,0.851))。值得注意的是,CircRNA_0001412与CRP显著相关,表明其作为RA疾病严重程度生物标志物的潜力。生物信息学分析预测,CircRNA_0001412和CircRNA_0001566可通过PI3K-Akt信号通路促进T细胞活化,从而导致RA发病机制。CircRNA_0001412和CircRNA_0001566是很有前景的RA诊断生物标志物,CircRNA_0001412还可作为炎症活动的潜在指标。这些发现为进一步研究环状RNA在RA中的诊断和预后效用提供了依据。

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