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肝片形吸虫侵袭性幼虫阶段表达的转录本调查。

Survey of transcripts expressed by the invasive juvenile stage of the liver fluke Fasciola hepatica.

机构信息

Departamento de Biologia Molecular e Biotecnologia, Universidade Federal do Rio Grande do Sul, UFRGS, Porto Alegre, Brazil.

出版信息

BMC Genomics. 2010 Apr 7;11:227. doi: 10.1186/1471-2164-11-227.

Abstract

BACKGROUND

The common liver fluke Fasciola hepatica is the agent of a zoonosis with significant economic consequences in livestock production worldwide, and increasing relevance to human health in developing countries. Although flukicidal drugs are available, re-infection and emerging resistance are demanding new efficient and inexpensive control strategies. Understanding the molecular mechanisms underlying the host-parasite interaction provide relevant clues in this search, while enlightening the physiological adaptations to parasitism. Genomics and transcriptomics are still in their infancy in F. hepatica, with very scarce information available from the invasive newly excysted juveniles (NEJ). Here we provide an initial glimpse to the transcriptomics of the NEJ, the first stage to interact with the mammalian host.

RESULTS

We catalogued more than 500 clusters generated from the analysis of F. hepatica juvenile expressed sequence tags (EST), several of them not detected in the adult stage. A set of putative F. hepatica specific transcripts, and a group of sequences conserved exclusively in flatworms were identified. These novel sequences along with a set of parasite transcripts absent in the host genomes are putative new targets for future anti-parasitic drugs or vaccine development. Comparisons of the F. hepatica sequences with other metazoans genomes or EST databases were consistent with the basal positioning of flatworms in the bilaterian phylogeny. Notably, GC content, codon usage and amino acid frequencies are remarkably different in Schistosomes to F. hepatica and other trematodes. Functional annotation of predicted proteins showed a general representation of diverse biological functions. Besides proteases and antioxidant enzymes expected to participate in the early interaction with the host, various proteins involved in gene expression, protein synthesis, cell signaling and mitochondrial enzymes were identified. Differential expression of secreted protease gene family members between juvenile and adult stages may respond to different needs during host colonization.

CONCLUSION

The knowledge of the genes expressed by the invasive stage of Fasciola hepatica is a starting point to unravel key aspects of this parasite's biology. The integration of the emerging transcriptomics, and proteomics data and the advent of functional genomics tools in this organism are positioning F. hepatica as an interesting model for trematode biology.

摘要

背景

常见的肝片吸虫 Fasciola hepatica 是一种人畜共患疾病的病原体,在全球范围内给畜牧业生产带来了重大的经济后果,并且在发展中国家对人类健康的相关性也在不断增加。尽管有杀吸虫药物可用,但再感染和新出现的耐药性要求新的高效和廉价的控制策略。了解宿主-寄生虫相互作用的分子机制为这一研究提供了相关线索,同时也揭示了寄生虫对寄生的生理适应。在肝片吸虫中,基因组学和转录组学仍处于起步阶段,来自新孵出的未囊化幼虫(NEJ)的信息非常有限。在这里,我们提供了 NEJ 转录组学的初步研究,这是与哺乳动物宿主相互作用的第一阶段。

结果

我们从肝片吸虫幼体表达序列标签(EST)的分析中编目了 500 多个簇,其中一些在成虫阶段未检测到。鉴定了一组推定的肝片吸虫特异性转录本,以及一组仅在扁形动物中保守的序列。这些新的序列以及一组在宿主基因组中不存在的寄生虫转录本是未来抗寄生虫药物或疫苗开发的潜在新靶标。将肝片吸虫序列与其他后生动物基因组或 EST 数据库进行比较,与扁形动物在两侧对称动物系统发育中的基础位置一致。值得注意的是,GC 含量、密码子使用和氨基酸频率在血吸虫中与肝片吸虫和其他吸虫有显著差异。预测蛋白的功能注释显示了广泛的生物功能。除了预期参与与宿主早期相互作用的蛋白酶和抗氧化酶外,还鉴定了各种参与基因表达、蛋白质合成、细胞信号和线粒体酶的蛋白质。幼虫和成虫阶段分泌蛋白酶基因家族成员的差异表达可能是对宿主定植过程中不同需求的响应。

结论

了解肝片吸虫侵袭阶段表达的基因是揭示该寄生虫生物学关键方面的起点。转录组学和蛋白质组学数据的不断涌现,以及功能基因组学工具在该生物中的应用,使肝片吸虫成为研究吸虫生物学的一个有趣模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7f2f/2867827/b34335503bee/1471-2164-11-227-1.jpg

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