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创伤弧菌中假定的依赖NADP(H)的氧化还原酶YncB的结晶及初步X射线晶体学分析

Crystallization and preliminary X-ray crystallographic analysis of the putative NADP(H)-dependent oxidoreductase YncB from Vibrio vulnificus.

作者信息

Kim Min-Kyu, An Young Jun, Jeong Chang-Sook, Cha Sun-Shin

机构信息

Marine Biotechnology Research Division, Korea Institute of Ocean Science and Technology, Ansan, Republic of Korea.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Sep 1;68(Pt 9):1098-101. doi: 10.1107/S1744309112030527. Epub 2012 Aug 31.

Abstract

The yncB gene product from Vibrio vulnificus, which belongs to the medium-chain dehydrogenase/reductase (MDR) superfamily, was crystallized using the microbatch crystallization method at 295 K. Diffraction data sets were collected using synchrotron radiation. Crystals of selenomethionine-substituted YncB protein belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 90.52, b = 91.56, c = 104.79 Å. Assuming the presence of two molecules in the asymmetric unit, the solvent content was estimated to be about 57%. Crystals of the YncB-NADP(H) complex belonged to space group P4(1)2(1)2 or P4(3)2(1)2, with unit-cell parameters a = b = 90.14, c = 105.61 Å. Assuming the presence of one molecule in the asymmetric unit, the solvent content was estimated to be about 56.42%.

摘要

创伤弧菌的yncB基因产物属于中链脱氢酶/还原酶(MDR)超家族,采用微量分批结晶法于295 K下进行结晶。使用同步辐射收集衍射数据集。硒代甲硫氨酸取代的YncB蛋白晶体属于空间群P2(1)2(1)2(1),晶胞参数a = 90.52,b = 91.56,c = 104.79 Å。假设不对称单元中有两个分子,溶剂含量估计约为57%。YncB-NADP(H)复合物晶体属于空间群P(4)12(1)2或P(4)32(1)2,晶胞参数a = b = 90.14,c = 105.61 Å。假设不对称单元中有一个分子,溶剂含量估计约为56.42%。

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