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DbVar 和 DGVa:基因组结构变异的公共档案。

DbVar and DGVa: public archives for genomic structural variation.

机构信息

European Bioinformatics Institute, Hinxton, CB10 1SD Cambridgeshire, UK.

出版信息

Nucleic Acids Res. 2013 Jan;41(Database issue):D936-41. doi: 10.1093/nar/gks1213. Epub 2012 Nov 27.

Abstract

Much has changed in the last two years at DGVa (http://www.ebi.ac.uk/dgva) and dbVar (http://www.ncbi.nlm.nih.gov/dbvar). We are now processing direct submissions rather than only curating data from the literature and our joint study catalog includes data from over 100 studies in 11 organisms. Studies from human dominate with data from control and case populations, tumor samples as well as three large curated studies derived from multiple sources. During the processing of these data, we have made improvements to our data model, submission process and data representation. Additionally, we have made significant improvements in providing access to these data via web and FTP interfaces.

摘要

在过去的两年中,DGVa(http://www.ebi.ac.uk/dgva)和 dbVar(http://www.ncbi.nlm.nih.gov/dbvar)发生了很多变化。我们现在不仅可以处理直接提交的数据,还可以从文献中整理数据,我们的联合研究目录包括来自 11 种生物的 100 多项研究的数据。来自人类的研究占据主导地位,包括对照和病例人群、肿瘤样本以及源自多个来源的三个大型经过整理的研究。在处理这些数据的过程中,我们改进了数据模型、提交流程和数据表示。此外,我们在通过 Web 和 FTP 接口提供这些数据的访问方面也取得了重大进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8b4/3531204/87bbef082d0e/gks1213f1p.jpg

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