基因结构显示服务器2.0：一个升级的基因特征可视化服务器。
GSDS 2.0: an upgraded gene feature visualization server.
作者信息
Hu Bo, Jin Jinpu, Guo An-Yuan, Zhang He, Luo Jingchu, Gao Ge
机构信息
State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Center for Bioinformatics, Peking University, Beijing 100871, People's Republic of China, College of Life Science, Beijing Normal University, Beijing 100875, People's Republic of China and Department of Systems Biology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, People's Republic of China State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Center for Bioinformatics, Peking University, Beijing 100871, People's Republic of China, College of Life Science, Beijing Normal University, Beijing 100875, People's Republic of China and Department of Systems Biology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, People's Republic of China.
State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Center for Bioinformatics, Peking University, Beijing 100871, People's Republic of China, College of Life Science, Beijing Normal University, Beijing 100875, People's Republic of China and Department of Systems Biology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, People's Republic of China.
出版信息
Bioinformatics. 2015 Apr 15;31(8):1296-7. doi: 10.1093/bioinformatics/btu817. Epub 2014 Dec 10.
UNLABELLED
: Visualizing genes' structure and annotated features helps biologists to investigate their function and evolution intuitively. The Gene Structure Display Server (GSDS) has been widely used by more than 60 000 users since its first publication in 2007. Here, we reported the upgraded GSDS 2.0 with a newly designed interface, supports for more types of annotation features and formats, as well as an integrated visual editor for editing the generated figure. Moreover, a user-specified phylogenetic tree can be added to facilitate further evolutionary analysis. The full source code is also available for downloading.
AVAILABILITY AND IMPLEMENTATION
Web server and source code are freely available at http://gsds.cbi.pku.edu.cn.
CONTACT
gaog@mail.cbi.pku.edu.cn or gsds@mail.cbi.pku.edu.cn
SUPPLEMENTARY INFORMATION
Supplementary data are available at Bioinformatics online.
未标注
可视化基因的结构和注释特征有助于生物学家直观地研究其功能和进化。自2007年首次发布以来，基因结构显示服务器（GSDS）已被6万多名用户广泛使用。在此，我们报告了升级版的GSDS 2.0，它具有新设计的界面，支持更多类型的注释特征和格式，以及一个用于编辑生成图形的集成可视化编辑器。此外，可以添加用户指定的系统发育树以促进进一步的进化分析。完整的源代码也可供下载。
可用性和实现方式
网络服务器和源代码可在http://gsds.cbi.pku.edu.cn免费获取。
联系方式
gaog@mail.cbi.pku.edu.cn或gsds@mail.cbi.pku.edu.cn
补充信息
补充数据可在《生物信息学》在线获取。
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