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转运RNA作为小功能RNA的来源。

Transfer RNA as a source of small functional RNA.

作者信息

Shigematsu Megumi, Honda Shozo, Kirino Yohei

出版信息

J Mol Biol Mol Imaging. 2014;1(2).

Abstract

Since their discovery in the 1950s, transfer RNAs (tRNAs) have been best known as adapter molecules that play a central role in translating genetic information. However, recent biochemical and bioinformatic evidence has led to a previously unexpected conceptual consensus that tRNAs are not always end products; they further serve as a source of small functional RNAs. In many organisms, specific tRNA fragments are produced from mature tRNAs or their precursor transcripts not as random degradation products, but as functional molecules involved in many biological processes beyond translation. In this review, we summarize recent studies of tRNA fragments that have provided new insights into tRNA biology by examining the molecular functions of tRNA fragments and proteins with which they interact.

摘要

自20世纪50年代被发现以来,转运RNA(tRNA)一直作为在遗传信息翻译过程中发挥核心作用的衔接分子而广为人知。然而,最近的生化和生物信息学证据已达成了一个此前未曾预料到的概念共识,即tRNA并不总是最终产物;它们还可作为小功能RNA的来源。在许多生物体中,特定的tRNA片段并非作为随机降解产物,而是作为参与翻译以外诸多生物过程的功能分子,从成熟tRNA或其前体转录本中产生。在本综述中,我们总结了tRNA片段的近期研究,这些研究通过考察tRNA片段及其相互作用的蛋白质的分子功能,为tRNA生物学提供了新见解。

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本文引用的文献

1
CLP1 as a novel player in linking tRNA splicing to neurodegenerative disorders.
Wiley Interdiscip Rev RNA. 2015 Jan-Feb;6(1):47-63. doi: 10.1002/wrna.1255. Epub 2014 Aug 20.
2
Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders.
EMBO J. 2014 Sep 17;33(18):2020-39. doi: 10.15252/embj.201489282. Epub 2014 Jul 25.
3
The human Piwi protein Hiwi2 associates with tRNA-derived piRNAs in somatic cells.
Nucleic Acids Res. 2014 Aug;42(14):8984-95. doi: 10.1093/nar/gku620. Epub 2014 Jul 18.
4
tRNAs as regulators of biological processes.
Front Genet. 2014 Jun 11;5:171. doi: 10.3389/fgene.2014.00171. eCollection 2014.
5
Control of mRNA turnover: implication of cytoplasmic RNA granules.
Semin Cell Dev Biol. 2014 Oct;34:15-23. doi: 10.1016/j.semcdb.2014.05.013. Epub 2014 Jun 16.
9
Angiogenin-cleaved tRNA halves interact with cytochrome c, protecting cells from apoptosis during osmotic stress.
Mol Cell Biol. 2014 Jul;34(13):2450-63. doi: 10.1128/MCB.00136-14. Epub 2014 Apr 21.
10
Hints of tRNA-Derived Small RNAs Role in RNA Silencing Mechanisms.
Genes (Basel). 2012 Oct 10;3(4):603-14. doi: 10.3390/genes3040603.

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