Suppr超能文献

结合核磁共振光谱和冷冻电子显微镜对小鼠ASC炎性小体的结构与组装研究

Structure and assembly of the mouse ASC inflammasome by combined NMR spectroscopy and cryo-electron microscopy.

作者信息

Sborgi Lorenzo, Ravotti Francesco, Dandey Venkata P, Dick Mathias S, Mazur Adam, Reckel Sina, Chami Mohamed, Scherer Sebastian, Huber Matthias, Böckmann Anja, Egelman Edward H, Stahlberg Henning, Broz Petr, Meier Beat H, Hiller Sebastian

机构信息

Biozentrum, University of Basel, 4056 Basel, Switzerland;

Physical Chemistry, Swiss Federal Institute of Technology in Zurich, 8093 Zurich, Switzerland;

出版信息

Proc Natl Acad Sci U S A. 2015 Oct 27;112(43):13237-42. doi: 10.1073/pnas.1507579112. Epub 2015 Oct 13.

Abstract

Inflammasomes are multiprotein complexes that control the innate immune response by activating caspase-1, thus promoting the secretion of cytokines in response to invading pathogens and endogenous triggers. Assembly of inflammasomes is induced by activation of a receptor protein. Many inflammasome receptors require the adapter protein ASC [apoptosis-associated speck-like protein containing a caspase-recruitment domain (CARD)], which consists of two domains, the N-terminal pyrin domain (PYD) and the C-terminal CARD. Upon activation, ASC forms large oligomeric filaments, which facilitate procaspase-1 recruitment. Here, we characterize the structure and filament formation of mouse ASC in vitro at atomic resolution. Information from cryo-electron microscopy and solid-state NMR spectroscopy is combined in a single structure calculation to obtain the atomic-resolution structure of the ASC filament. Perturbations of NMR resonances upon filament formation monitor the specific binding interfaces of ASC-PYD association. Importantly, NMR experiments show the rigidity of the PYD forming the core of the filament as well as the high mobility of the CARD relative to this core. The findings are validated by structure-based mutagenesis experiments in cultured macrophages. The 3D structure of the mouse ASC-PYD filament is highly similar to the recently determined human ASC-PYD filament, suggesting evolutionary conservation of ASC-dependent inflammasome mechanisms.

摘要

炎性小体是多蛋白复合物,通过激活半胱天冬酶 -1来控制先天性免疫反应,从而促进细胞因子的分泌以应对入侵病原体和内源性触发因素。炎性小体的组装由受体蛋白的激活诱导。许多炎性小体受体需要衔接蛋白ASC[含半胱天冬酶招募结构域(CARD)的凋亡相关斑点样蛋白],其由两个结构域组成,即N端的吡啉结构域(PYD)和C端的CARD。激活后,ASC形成大型寡聚丝,促进前体半胱天冬酶 -1的募集。在此,我们在体外以原子分辨率表征了小鼠ASC的结构和丝形成。来自冷冻电子显微镜和固态核磁共振光谱的信息在单一结构计算中相结合,以获得ASC丝的原子分辨率结构。丝形成时核磁共振共振的扰动监测了ASC-PYD缔合的特定结合界面。重要的是,核磁共振实验表明形成丝核心的PYD具有刚性,以及CARD相对于该核心具有高流动性。这些发现通过在培养巨噬细胞中的基于结构的诱变实验得到验证。小鼠ASC-PYD丝的三维结构与最近确定的人ASC-PYD丝高度相似,表明ASC依赖性炎性小体机制的进化保守性。

相似文献

1
Structure and assembly of the mouse ASC inflammasome by combined NMR spectroscopy and cryo-electron microscopy.
Proc Natl Acad Sci U S A. 2015 Oct 27;112(43):13237-42. doi: 10.1073/pnas.1507579112. Epub 2015 Oct 13.
2
Inhibiting the inflammasome: one domain at a time.
Immunol Rev. 2015 May;265(1):205-16. doi: 10.1111/imr.12290.
3
The inflammasome adapter ASC assembles into filaments with integral participation of its two Death Domains, PYD and CARD.
J Biol Chem. 2019 Jan 11;294(2):439-452. doi: 10.1074/jbc.RA118.004407. Epub 2018 Nov 20.
4
Unified polymerization mechanism for the assembly of ASC-dependent inflammasomes.
Cell. 2014 Mar 13;156(6):1193-1206. doi: 10.1016/j.cell.2014.02.008.
5
Self-oligomerization of ASC PYD domain prevents the assembly of inflammasome in vitro.
Appl Biochem Biotechnol. 2014 Apr;172(8):3902-12. doi: 10.1007/s12010-014-0819-0. Epub 2014 Mar 2.
6
An integrative protocol for the structure determination of the mouse ASC-PYD filament.
Methods Enzymol. 2019;625:205-222. doi: 10.1016/bs.mie.2019.04.033. Epub 2019 May 20.
7
Protein interactions of the inflammasome adapter ASC by solution NMR.
Methods Enzymol. 2019;625:223-252. doi: 10.1016/bs.mie.2019.07.008. Epub 2019 Aug 8.
8
Sequence-specific solid-state NMR assignments of the mouse ASC PYRIN domain in its filament form.
Biomol NMR Assign. 2016 Apr;10(1):107-15. doi: 10.1007/s12104-015-9647-6. Epub 2015 Sep 24.
9
Caspase-1 autoproteolysis is differentially required for NLRP1b and NLRP3 inflammasome function.
Proc Natl Acad Sci U S A. 2014 Dec 2;111(48):17254-9. doi: 10.1073/pnas.1415756111. Epub 2014 Nov 17.
10
Plasticity in PYD assembly revealed by cryo-EM structure of the PYD filament of AIM2.
Cell Discov. 2015;1:15013-. doi: 10.1038/celldisc.2015.13. Epub 2015 Jun 23.

引用本文的文献

3
NLRP3 inflammasome in cardiovascular diseases: an update.
Front Immunol. 2025 Feb 26;16:1550226. doi: 10.3389/fimmu.2025.1550226. eCollection 2025.
5
A structural atlas of death domain fold proteins reveals their versatile roles in biology and function.
Proc Natl Acad Sci U S A. 2025 Feb 25;122(8):e2426986122. doi: 10.1073/pnas.2426986122. Epub 2025 Feb 20.
6
Ablation of lipocalin-2 reduces neuroinflammation in a mouse model of Krabbe disease.
Sci Rep. 2024 Dec 30;14(1):31822. doi: 10.1038/s41598-024-82927-1.
7
Analysis of the structure and interactions of the SARS-CoV-2 ORF7b accessory protein.
Proc Natl Acad Sci U S A. 2024 Nov 12;121(46):e2407731121. doi: 10.1073/pnas.2407731121. Epub 2024 Nov 7.
9
NLRP inflammasomes in health and disease.
Mol Biomed. 2024 Apr 22;5(1):14. doi: 10.1186/s43556-024-00179-x.
10
Molecular basis for curvature formation in SepF polymerization.
Proc Natl Acad Sci U S A. 2024 Feb 27;121(9):e2316922121. doi: 10.1073/pnas.2316922121. Epub 2024 Feb 21.

本文引用的文献

1
Sequence-specific solid-state NMR assignments of the mouse ASC PYRIN domain in its filament form.
Biomol NMR Assign. 2016 Apr;10(1):107-15. doi: 10.1007/s12104-015-9647-6. Epub 2015 Sep 24.
2
Mechanisms of inflammasome activation: recent advances and novel insights.
Trends Cell Biol. 2015 May;25(5):308-15. doi: 10.1016/j.tcb.2014.12.009. Epub 2015 Jan 29.
3
The structure of fibrils from 'misfolded' proteins.
Curr Opin Struct Biol. 2015 Feb;30:43-49. doi: 10.1016/j.sbi.2014.12.001. Epub 2014 Dec 24.
4
Structural mechanisms of inflammasome assembly.
FEBS J. 2015 Feb;282(3):435-44. doi: 10.1111/febs.13133. Epub 2014 Nov 21.
6
Identification of multifaceted binding modes for pyrin and ASC pyrin domains gives insights into pyrin inflammasome assembly.
J Biol Chem. 2014 Aug 22;289(34):23504-19. doi: 10.1074/jbc.M114.553305. Epub 2014 Jul 8.
7
Mechanisms and functions of inflammasomes.
Cell. 2014 May 22;157(5):1013-22. doi: 10.1016/j.cell.2014.04.007.
8
2dx_automator: implementation of a semiautomatic high-throughput high-resolution cryo-electron crystallography pipeline.
J Struct Biol. 2014 May;186(2):302-7. doi: 10.1016/j.jsb.2014.03.016. Epub 2014 Mar 28.
9
Unified polymerization mechanism for the assembly of ASC-dependent inflammasomes.
Cell. 2014 Mar 13;156(6):1193-1206. doi: 10.1016/j.cell.2014.02.008.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验