Al Atrouni Ahmad, Hamze Monzer, Jisr Tamima, Lemarié Carole, Eveillard Matthieu, Joly-Guillou Marie-Laure, Kempf Marie
Laboratoire Microbiologie Santé et Environnement (LMSE), Ecole Doctorale des Sciences et de Technologie et Faculté de Santé Publique, Université Libanaise, Tripoli, Lebanon; ATOMycA, InsermAtip-Avenir Team, CRCNA, Inserm U892, 6299 CNRS, University of Angers, Angers, France.
Laboratoire Microbiologie Santé et Environnement (LMSE), Ecole Doctorale des Sciences et de Technologie et Faculté de Santé Publique, Université Libanaise, Tripoli, Lebanon.
Int J Infect Dis. 2016 Nov;52:29-36. doi: 10.1016/j.ijid.2016.09.017. Epub 2016 Sep 20.
To investigate the molecular epidemiology of Acinetobacter baumannii strains isolated from different hospitals in Lebanon.
A total of 119 non-duplicate Acinetobacter strains were identified using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) and partial rpoB gene sequencing. Antibiotic susceptibility testing was performed by disc diffusion method and all identified carbapenem-resistant isolates were investigated by PCR assays for the presence of the carbapenemase-encoding genes. Multilocus sequence typing (MLST) and pulsed-field gel electrophoresis (PFGE) were used for molecular typing.
Of the 119 A. baumannii isolates, 76.5% were resistant to carbapenems. The most common carbapenemase was the OXA-23-type, found in 82 isolates. The study of population structure using MLST revealed the presence of 30 sequence types (STs) including 18 new ones, with ST2 being the most commonly detected, accounting for 61% of the isolates typed. PFGE performed on all strains of ST2 identified a major cluster of 53 isolates, in addition to three other minor clusters and ten unique profiles.
This study highlights the wide dissemination of highly related OXA-23-producing carbapenem-resistant A. baumannii belonging to the international clone II in Lebanon. Thus, appropriate infection control measures are recommended in order to control the geographical spread of this clone in this country.
调查从黎巴嫩不同医院分离出的鲍曼不动杆菌菌株的分子流行病学。
使用基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF MS)和rpoB基因部分测序鉴定了总共119株非重复的不动杆菌菌株。采用纸片扩散法进行药敏试验,对所有鉴定出的耐碳青霉烯类菌株通过PCR检测碳青霉烯酶编码基因的存在情况。采用多位点序列分型(MLST)和脉冲场凝胶电泳(PFGE)进行分子分型。
在119株鲍曼不动杆菌分离株中,76.5%对碳青霉烯类耐药。最常见的碳青霉烯酶是OXA-23型,在82株分离株中发现。使用MLST对群体结构的研究显示存在30种序列类型(STs),包括18种新的类型,其中ST2是最常检测到的,占分型分离株的61%。对所有ST2菌株进行的PFGE鉴定出一个由53株分离株组成的主要簇,此外还有其他三个小簇和十个独特的图谱。
本研究强调了在黎巴嫩广泛传播的高度相关的产OXA-23型碳青霉烯类耐药鲍曼不动杆菌,属于国际克隆II。因此,建议采取适当的感染控制措施,以控制该克隆在该国的地理传播。