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重复回文聚合酶链反应快速监测医院科室中万古霉素耐药粪肠球菌。

Rapid monitoring of vancomycin-resistant Enterococcus faecium in hospital departments by repetitive element palindromic polymerase chain reaction.

机构信息

Institute for Medical Microbiology, Immunology and Parasitology (IMMIP), University Hospital Bonn, Bonn, Germany; Department for Orthopedics, University Hospital Bonn, Bonn, Germany.

Institute for Medical Microbiology, Immunology and Parasitology (IMMIP), University Hospital Bonn, Bonn, Germany.

出版信息

J Hosp Infect. 2018 Jun;99(2):208-217. doi: 10.1016/j.jhin.2017.11.017. Epub 2018 Jan 17.

Abstract

BACKGROUND

The current increase in nosocomial infections caused by vancomycin-resistant enterococci (VRE) warrants improvement of detection methods and hygiene measures. Knowledge of the local epidemiology is important for monitoring compliance of medical personnel with hygiene measures.

AIM

To evaluate semi-automated repetitive element palindromic polymerase chain reaction (rep-PCR) for rapid molecular typing of VRE.

METHODS

Primary VRE isolates were collected during an observation period of one year and retrospectively typed by rep-PCR. Molecular typing was performed on isolates from two departments with elevated VRE rates and patients with increased risk for systemic VRE infections. Typing results were correlated with temporal and spatial information on patient moves, VRE laboratory results and multi-locus sequence typing (MLST).

FINDINGS

Approximately 70% of VRE isolates within a department could be assigned to similarity clusters. Spread of VRE was limited to the individual departments. There was no evidence for spread of endemic VRE strains within the geographical catchment area of the hospital. Our results demonstrate the utility of rep-PCR typing on a department level. However, a Diversilab threshold of ≥98% had to be applied to claim similarity, and suspected transmissions needed to be confirmed by vanA/B genotyping and compiled information on spatial and temporal patient contact. MLST verified the findings.

CONCLUSION

Spread of predominantly detected vancomycin-resistant Enterococcus faecium was limited to the department level with no evidence for wider dissemination within the hospital. Well-standardized and validated (semi-)automated rep-PCR systems are useful for rapid detection of possible VRE transmission. However, suspected transmissions need to be confirmed by clinical and microbiological parameters.

摘要

背景

耐万古霉素肠球菌(VRE)引起的医院感染不断增加,因此需要改进检测方法和卫生措施。了解当地的流行病学情况对于监测医务人员对卫生措施的遵守情况非常重要。

目的

评估半自动化重复回文单位聚合酶链反应(rep-PCR)在 VRE 快速分子分型中的应用。

方法

在为期一年的观察期内收集原发性 VRE 分离株,并通过 rep-PCR 进行回顾性分型。对两个 VRE 检出率较高的科室和具有全身性 VRE 感染风险增加的患者的分离株进行分子分型。将分型结果与患者移动的时间和空间信息、VRE 实验室结果和多位点序列分型(MLST)进行相关性分析。

结果

同一科室内约 70%的 VRE 分离株可归入相似性聚类。VRE 的传播仅限于个别科室。在医院的地理范围内,没有证据表明地方性 VRE 菌株的传播。我们的结果表明 rep-PCR 分型在科室水平上具有实用性。然而,只有当 Diversilab 阈值≥98%时,才能声称存在相似性,疑似传播需要通过 vanA/B 基因分型和有关时空患者接触的信息进行确认。MLST 验证了这些发现。

结论

主要检测到的万古霉素耐药粪肠球菌的传播仅限于科室水平,在医院范围内没有证据表明更广泛的传播。经过良好标准化和验证的(半)自动化 rep-PCR 系统对于快速检测可能的 VRE 传播非常有用。然而,疑似传播需要通过临床和微生物学参数进行确认。

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