Suppr超能文献

提供了关于细菌生物膜黏附的见解。

The 1.9 Å crystal structure of the extracellular matrix protein Bap1 from provides insights into bacterial biofilm adhesion.

机构信息

Department of Molecular Biology and Biochemistry, Molecular Biophysics Program, Wesleyan University, Middletown, Connecticut 06459.

Department of Molecular Biology and Biochemistry, Molecular Biophysics Program, Wesleyan University, Middletown, Connecticut 06459

出版信息

J Biol Chem. 2019 Oct 4;294(40):14499-14511. doi: 10.1074/jbc.RA119.008335. Epub 2019 Aug 22.

Abstract

Growth of the cholera bacterium in a biofilm community contributes to both its pathogenicity and survival in aquatic environmental niches. The major components of biofilms include olyaccharide (VPS) and the extracellular matrix proteins RbmA, RbmC, and Bap1. To further elucidate the previously observed overlapping roles of Bap1 and RbmC in biofilm architecture and surface attachment, here we investigated the structural and functional properties of Bap1. Soluble expression of Bap1 was possible only after the removal of an internal 57-amino-acid-long hydrophobic insertion sequence. The crystal structure of Bap1 at 1.9 Å resolution revealed a two-domain assembly made up of an eight-bladed β-propeller interrupted by a β-prism domain. The structure also revealed metal-binding sites within canonical calcium blade motifs, which appear to have structural rather than functional roles. Contrary to results previously observed with RbmC, the Bap1 β-prism domain did not exhibit affinity for complex -glycans, suggesting an altered role of this domain in biofilm-surface adhesion. Native polyacrylamide gel shift analysis did suggest that Bap1 exhibits lectin activity with a preference for anionic or linear polysaccharides. Our results suggest a model for biofilms in which Bap1 and RbmC play dominant but differing adhesive roles in biofilms, allowing bacterial attachment to diverse environmental or host surfaces.

摘要

在生物膜群落中,霍乱弧菌的生长有助于其在水生环境生态位中的致病性和存活。生物膜的主要成分包括多糖(VPS)和细胞外基质蛋白 RbmA、RbmC 和 Bap1。为了进一步阐明 Bap1 和 RbmC 在生物膜结构和表面附着中观察到的重叠作用,我们在这里研究了 Bap1 的结构和功能特性。只有去除内部 57 个氨基酸长的疏水性插入序列后,才能实现 Bap1 的可溶性表达。Bap1 的晶体结构分辨率为 1.9Å,揭示了由八个叶片的β-螺旋桨组成的两结构域组装体,其中被β-棱柱结构域打断。该结构还揭示了在典型钙叶片基序内的金属结合位点,这些位点似乎具有结构而不是功能作用。与之前在 RbmC 中观察到的结果相反,Bap1 的β-棱柱结构域没有表现出对复合聚糖的亲和力,这表明该结构域在生物膜-表面粘附中的作用发生了改变。天然聚丙烯酰胺凝胶迁移分析确实表明,Bap1 具有凝集素活性,对阴离子或线性多糖具有偏好性。我们的结果提出了一个生物膜模型,其中 Bap1 和 RbmC 在生物膜中发挥主导但不同的粘附作用,允许细菌附着到不同的环境或宿主表面。

相似文献

1
The 1.9 Å crystal structure of the extracellular matrix protein Bap1 from provides insights into bacterial biofilm adhesion.
J Biol Chem. 2019 Oct 4;294(40):14499-14511. doi: 10.1074/jbc.RA119.008335. Epub 2019 Aug 22.
2
Outer membrane vesicles and the outer membrane protein OmpU govern biofilm matrix assembly.
mBio. 2024 Feb 14;15(2):e0330423. doi: 10.1128/mbio.03304-23. Epub 2024 Jan 11.
3
Structural basis of mammalian glycan targeting by Vibrio cholerae cytolysin and biofilm proteins.
PLoS Pathog. 2018 Feb 12;14(2):e1006841. doi: 10.1371/journal.ppat.1006841. eCollection 2018 Feb.
4
In situ proteolysis of the Vibrio cholerae matrix protein RbmA promotes biofilm recruitment.
Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10491-6. doi: 10.1073/pnas.1512424112. Epub 2015 Aug 3.
5
Structural dynamics of RbmA governs plasticity of biofilms.
Elife. 2017 Aug 1;6:e26163. doi: 10.7554/eLife.26163.
6
Structural basis for biofilm formation via the Vibrio cholerae matrix protein RbmA.
J Bacteriol. 2013 Jul;195(14):3277-86. doi: 10.1128/JB.00374-13. Epub 2013 May 17.
7
Role of Vibrio polysaccharide (vps) genes in VPS production, biofilm formation and Vibrio cholerae pathogenesis.
Microbiology (Reading). 2010 Sep;156(Pt 9):2757-2769. doi: 10.1099/mic.0.040196-0. Epub 2010 May 13.
8
The rbmBCDEF gene cluster modulates development of rugose colony morphology and biofilm formation in Vibrio cholerae.
J Bacteriol. 2007 Mar;189(6):2319-30. doi: 10.1128/JB.01569-06. Epub 2007 Jan 12.
9
The Type II secretion system delivers matrix proteins for biofilm formation by Vibrio cholerae.
J Bacteriol. 2014 Dec;196(24):4245-52. doi: 10.1128/JB.01944-14. Epub 2014 Sep 29.

引用本文的文献

1
Dissecting the physics of bacterial biofilms with agent-based simulations.
Curr Opin Solid State Mater Sci. 2025 Jul;37. doi: 10.1016/j.cossms.2025.101228. Epub 2025 May 31.
3
Vibrio cholerae RbmB is an α-1,4-polysaccharide lyase with biofilm-disrupting activity against Vibrio polysaccharide (VPS).
PLoS Pathog. 2024 Dec 2;20(12):e1012750. doi: 10.1371/journal.ppat.1012750. eCollection 2024 Dec.
5
New β-Propellers Are Continuously Amplified From Single Blades in all Major Lineages of the β-Propeller Superfamily.
Front Mol Biosci. 2022 Jun 9;9:895496. doi: 10.3389/fmolb.2022.895496. eCollection 2022.
6
Searching for the Secret of Stickiness: How Biofilms Adhere to Surfaces.
Front Microbiol. 2021 Jul 8;12:686793. doi: 10.3389/fmicb.2021.686793. eCollection 2021.
7
Outer Membrane Vesicles Released From Strains Are Involved in the Biofilm Formation.
Front Microbiol. 2021 Jan 7;11:613650. doi: 10.3389/fmicb.2020.613650. eCollection 2020.

本文引用的文献

1
Architecture and Evolution of Blade Assembly in β-propeller Lectins.
Structure. 2019 May 7;27(5):764-775.e3. doi: 10.1016/j.str.2019.02.002. Epub 2019 Mar 7.
2
Structural basis of mammalian glycan targeting by Vibrio cholerae cytolysin and biofilm proteins.
PLoS Pathog. 2018 Feb 12;14(2):e1006841. doi: 10.1371/journal.ppat.1006841. eCollection 2018 Feb.
3
Improvements to the APBS biomolecular solvation software suite.
Protein Sci. 2018 Jan;27(1):112-128. doi: 10.1002/pro.3280. Epub 2017 Oct 24.
4
Structural dynamics of RbmA governs plasticity of biofilms.
Elife. 2017 Aug 1;6:e26163. doi: 10.7554/eLife.26163.
5
Unusual active site location and catalytic apparatus in a glycoside hydrolase family.
Proc Natl Acad Sci U S A. 2017 May 9;114(19):4936-4941. doi: 10.1073/pnas.1701130114. Epub 2017 Apr 10.
6
Vibrio cholerae biofilm growth program and architecture revealed by single-cell live imaging.
Proc Natl Acad Sci U S A. 2016 Sep 6;113(36):E5337-43. doi: 10.1073/pnas.1611494113. Epub 2016 Aug 23.
7
CarbBuilder: Software for building molecular models of complex oligo- and polysaccharide structures.
J Comput Chem. 2016 Aug 15;37(22):2098-105. doi: 10.1002/jcc.24428. Epub 2016 Jun 18.
8
Staying Alive: Vibrio cholerae's Cycle of Environmental Survival, Transmission, and Dissemination.
Microbiol Spectr. 2016 Apr;4(2). doi: 10.1128/microbiolspec.VMBF-0015-2015.
9
Amyloid Structures as Biofilm Matrix Scaffolds.
J Bacteriol. 2016 Sep 9;198(19):2579-88. doi: 10.1128/JB.00122-16. Print 2016 Oct 1.
10
Architectural transitions in Vibrio cholerae biofilms at single-cell resolution.
Proc Natl Acad Sci U S A. 2016 Apr 5;113(14):E2066-72. doi: 10.1073/pnas.1601702113. Epub 2016 Mar 1.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验