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欧洲医用水蛭 Hirudo medicinalis(环节动物门,蛭纲,水蛭目)基因组草图,重点关注抗凝血剂。

Draft genome of the European medicinal leech Hirudo medicinalis (Annelida, Clitellata, Hirudiniformes) with emphasis on anticoagulants.

机构信息

Department of Natural History, Royal Ontario Museum, 100 Queen's Park, Toronto, ON, M5S 2C6, Canada.

Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks Street, Toronto, ON, M5S 2B4, Canada.

出版信息

Sci Rep. 2020 Jun 18;10(1):9885. doi: 10.1038/s41598-020-66749-5.

Abstract

The European medicinal leech has been used for medicinal purposes for millennia, and continues to be used today in modern hospital settings. Its utility is granted by the extremely potent anticoagulation factors that the leech secretes into the incision wound during feeding and, although a handful of studies have targeted certain anticoagulants, the full range of anticoagulation factors expressed by this species remains unknown. Here, we present the first draft genome of the European medicinal leech, Hirudo medicinalis, and estimate that we have sequenced between 79-94% of the full genome. Leveraging these data, we searched for anticoagulation factors across the genome of H. medicinalis. Following orthology determination through a series of BLAST searches, as well as phylogenetic analyses, we estimate that fully 15 different known anticoagulation factors are utilized by the species, and that 17 other proteins that have been linked to antihemostasis are also present in the genome. We underscore the utility of the draft genome for comparative studies of leeches and discuss our results in an evolutionary context.

摘要

欧洲医用水蛭已经被用于医疗目的几千年了,并且在现代医院环境中仍然被使用。它的效用归功于水蛭在进食时分泌到切口伤口中的极其有效的抗凝因子,尽管有少数研究针对某些抗凝剂,但该物种表达的完整抗凝因子范围仍不清楚。在这里,我们展示了欧洲医用水蛭 Hirudo medicinalis 的第一个基因组草图,并估计我们已经测序了完整基因组的 79-94%。利用这些数据,我们在 H. medicinalis 的基因组中搜索了抗凝因子。通过一系列 BLAST 搜索和系统发育分析确定了同源性后,我们估计该物种总共利用了 15 种不同的已知抗凝因子,并且在基因组中还存在 17 种与抗止血相关的其他蛋白质。我们强调了该草图基因组在比较水蛭研究中的效用,并在进化背景下讨论了我们的结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa2c/7303139/ba4aea897580/41598_2020_66749_Fig1_HTML.jpg

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