Suppr超能文献

哪些斑马鱼品系更适合进行行为学研究?基于表型组学方法的综合比较

Which Zebrafish Strains Are More Suitable to Perform Behavioral Studies? A Comprehensive Comparison by Phenomic Approach.

作者信息

Audira Gilbert, Siregar Petrus, Strungaru Stefan-Adrian, Huang Jong-Chin, Hsiao Chung-Der

机构信息

Department of Chemistry, Chung Yuan Christian University, Chung-Li 320314, Taiwan.

Department of Bioscience Technology, Chung Yuan Christian University, Chung-Li 320314, Taiwan.

出版信息

Biology (Basel). 2020 Aug 1;9(8):200. doi: 10.3390/biology9080200.

Abstract

Wild-type (WT) zebrafish are commonly used in behavioral tests, however, the term WT corresponds to many different strains, such as AB, Tübingen long fin (TL), and Wild Indian Karyotype (WIK). Since these strains are widely used, there has to be at least one study to demonstrate the behavioral differences between them. In our study, six zebrafish strains were used, which are AB, absolute, TL, golden, pet store-purchased (PET), and WIK zebrafishes. The behavior of these fishes was tested in a set of behavioral tests, including novel tank, mirror-biting, predator avoidance, social interaction, and shoaling tests. From the results, the differences were observed for all behavioral tests, and each strain displayed particular behavior depending on the tests. In addition, from the heatmap and PCA (principal component analysis) results, two major clusters were displayed, separating the AB and TL zebrafishes with other strains in another cluster. Furthermore, after the coefficient of variation of each strain in every behavioral test was calculated, the AB and TL zebrafishes were found to possess a low percentage of the coefficient of variation, highlighting the strong reproducibility and the robustness of the behaviors tested in both fishes. Each zebrafish strain tested in this experiment showed specifically different behaviors from each other, thus, strain-specific zebrafish behavior should be considered when designing experiments using zebrafish behavior.

摘要

野生型(WT)斑马鱼常用于行为测试,然而,“WT”一词对应许多不同的品系,如AB、图宾根长鳍(TL)和野生印度核型(WIK)。由于这些品系被广泛使用,因此至少应该有一项研究来证明它们之间的行为差异。在我们的研究中,使用了六种斑马鱼品系,即AB、absolute、TL、金色、宠物店购买的(PET)和WIK斑马鱼。这些鱼的行为在一系列行为测试中进行了测试,包括新鱼缸、咬镜子、躲避捕食者、社交互动和群聚测试。从结果来看,在所有行为测试中都观察到了差异,并且每个品系根据测试表现出特定的行为。此外,从热图和主成分分析(PCA)结果来看,显示出两个主要的聚类,将AB和TL斑马鱼与其他品系分在另一个聚类中。此外,在计算了每个品系在每项行为测试中的变异系数后,发现AB和TL斑马鱼的变异系数百分比很低,突出了这两种鱼所测试行为的强可重复性和稳健性。本实验中测试的每个斑马鱼品系都表现出彼此特别不同的行为,因此,在设计使用斑马鱼行为的实验时应考虑品系特异性的斑马鱼行为。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3030/7465594/599b7c45bf1c/biology-09-00200-g001a.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验